RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 WDR34Q96EX3 536 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 VPS39Q96JC1 886 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 SECISBP2Q96T21 854 aaKnown RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 TUBA1CQ9BQE3 449 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 EFCAB11Q9BUY7 163 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 MS4A8Q9BY19 250 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 CNOT10Q9H9A5 744 aaKnown RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 LZTFL1Q9NQ48 299 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 TEX10Q9NXF1 929 aaPredicted RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 MS4A12Q9NXJ0 267 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 FETUBQ9UGM5 382 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 C2orf92A0A1B0GVN3 265 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 TAPBPO15533 448 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 OR10H2O60403 315 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 SCELO95171 688 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 TGFB1P01137 390 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 CPN1P15169 458 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 CD22P20273 847 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 GCKP35557 465 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 GGT5P36269 586 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 CASP3P42574 277 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 SSR2P43308 183 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 EEF1A1P68104 462 aaKnown RBP15.65■□□□□ 0.1
VIM-204ENST00000478746 RPP38P78345 283 aaKnown RBP15.65■□□□□ 0.1
VIM-204ENST00000478746 PCDH1Q08174 1060 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 GAB1Q13480 694 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 ZNF460Q14592 562 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 TGFBIQ15582 683 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 MSS51Q4VC12 460 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 RNASEH2BQ5TBB1 312 aaKnown RBP15.65■□□□□ 0.1
VIM-204ENST00000478746 EEF1A1P5Q5VTE0 462 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 OR4C11Q6IEV9 310 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 YRDCQ86U90 279 aaKnown RBP15.65■□□□□ 0.1
VIM-204ENST00000478746 IGDCC3Q8IVU1 814 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 TCAIMQ8N3R3 496 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 FAM83FQ8NEG4 500 aaPredicted RBP15.65■□□□□ 0.1
VIM-204ENST00000478746 ZNF473Q8WTR7 871 aaKnown RBP15.65■□□□□ 0.1
VIM-204ENST00000478746 ANKRD49Q8WVL7 239 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 RIT1Q92963 219 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 WNT2BQ93097 391 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 TP53INP1Q96A56 240 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 PIK3IP1Q96FE7 263 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 WFIKKN1Q96NZ8 548 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 PELOQ9BRX2 385 aaKnown RBP15.65■□□□□ 0.1
VIM-204ENST00000478746 ACBD3Q9H3P7 528 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 SNX15Q9NRS6 342 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 ZNF226Q9NYT6 803 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 WWOXQ9NZC7 414 aa15.65■□□□□ 0.1
VIM-204ENST00000478746 CHD3Q12873 2000 aaKnown RBP15.65■□□□□ 0.1
VIM-204ENST00000478746 MED12LQ86YW9 2145 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 RNF212BA8MTL3 300 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 DEFB108AA8MXU0 73 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 SAP18O00422 153 aaKnown RBP15.64■□□□□ 0.09
VIM-204ENST00000478746 GNB5O14775 395 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 SIAH2O43255 324 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 CDC25BP30305 580 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 MC3RP41968 323 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 HSPA7P48741 367 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 TMED10P49755 219 aaKnown RBP15.64■□□□□ 0.09
VIM-204ENST00000478746 IRF8Q02556 426 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 SRYQ05066 204 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 FAM27E3Q08E93 113 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 SETDB1Q15047 1291 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 SPRED3Q2MJR0 410 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 FBXO48Q5FWF7 155 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 HLA-DQA1Q5Y7H0 255 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 C18orf63Q68DL7 685 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 TIGD3Q6B0B8 471 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 GPR180Q86V85 440 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 GCNT2Q8N0V5 402 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 ZNF441Q8N8Z8 693 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 TRIM58Q8NG06 486 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 OR1J4Q8NGS1 313 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 ESAMQ96AP7 390 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 TMEM41AQ96HV5 264 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 TMEM79Q9BSE2 394 aa15.64■□□□□ 0.09
VIM-204ENST00000478746 GOLGA6L6A8MZA4 724 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 H0Y3Z8 333 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 SNPHO15079 494 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 STK16O75716 305 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 GPR75O95800 540 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 PTPN6P29350 595 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 CPOXP36551 454 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 CASP2P42575 452 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 NRG3P56975 720 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 TAS2R39P59534 338 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 CHIT1Q13231 466 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 PDK4Q16654 411 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 TRMT10BQ6PF06 316 aaKnown RBP15.63■□□□□ 0.09
VIM-204ENST00000478746 ENPP6Q6UWR7 440 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 PLXDC2Q6UX71 529 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 C20orf204Q6ZNR8 217 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 PPP1R14CQ8TAE6 165 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 CMTM7Q96FZ5 175 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 CFAP36Q96G28 342 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 UCN2Q96RP3 112 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 SORBS1Q9BX66 1292 aaKnown RBP15.63■□□□□ 0.09
VIM-204ENST00000478746 GSX2Q9BZM3 304 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 PLAC1Q9HBJ0 212 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 KLHL28Q9NXS3 571 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms