RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 DDCP20711 480 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 MAPK1P28482 360 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 SSTR4P31391 388 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 GPR143P51810 404 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 HK2P52789 917 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 MLLT10P55197 1068 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 MRPS35P82673 323 aaKnown RBP6.41□□□□□ -1.38
BRCA1-215ENST00000478531 OC90Q02509 493 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-215ENST00000478531 DUSP2Q05923 314 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 BIKQ13323 160 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 PTGR1Q14914 329 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF169Q14929 603 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-215ENST00000478531 LTB4RQ15722 352 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 PLEKHN1Q494U1 663 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-215ENST00000478531 PRR30Q53SZ7 412 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-215ENST00000478531 FAM71E1Q6IPT2 247 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 ANKRD26P1Q6NSI1 321 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 H3F3CQ6NXT2 135 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 IGFL2Q6UWQ7 119 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 IGFL3Q6UXB1 125 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 RNF111Q6ZNA4 994 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 IKBIPQ70UQ0 350 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 HPS6Q86YV9 775 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 TICAM1Q8IUC6 712 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 C9orf40Q8IXQ3 194 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 RAB3IL1Q8TBN0 382 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 LRRC8CQ8TDW0 803 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 PNPLA2Q96AD5 504 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 CNRIP1Q96F85 164 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-215ENST00000478531 FBXL20Q96IG2 436 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 BBS4Q96RK4 519 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 LMF1Q96S06 567 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 CCT7Q99832 543 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 CXorf21Q9HAI6 301 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 SIRT5Q9NXA8 310 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 PPIEQ9UNP9 301 aaKnown RBP6.41□□□□□ -1.38
BRCA1-215ENST00000478531 TMED5Q9Y3A6 229 aa6.41□□□□□ -1.38
BRCA1-215ENST00000478531 OR5H15A6NDH6 313 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 SUV39H1O43463 412 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 SNNO75324 88 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 ITGA10O75578 1167 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 ZFAND5O76080 213 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 ATP1B1P05026 303 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 BCKDHAP12694 445 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 CSNK2A2P19784 350 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 NTSP30990 170 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 HPCAL1P37235 193 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 CASRP41180 1078 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 GSTM5P46439 218 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 TNFSF10P50591 281 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 NCBP2P52298 156 aaKnown RBP eCLIP6.4□□□□□ -1.385e-10■■■■■ 33.9
BRCA1-215ENST00000478531 MLF1P58340 268 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 RNF4P78317 190 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 OCRLQ01968 901 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 TUBA3CQ13748 450 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 EXOSC7Q15024 291 aaKnown RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 TLR1Q15399 786 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 OR1C1Q15619 314 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 SPRED3Q2MJR0 410 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 C6orf136Q5SQH8 315 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF468Q5VIY5 522 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 TUBA3EQ6PEY2 450 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 FAM111BQ6SJ93 734 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 SLC29A4Q7RTT9 530 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF605Q86T29 641 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 CCDC116Q8IYX3 515 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 KIRREL3Q8IZU9 778 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 VWA5B2Q8N398 1253 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 TMEM156Q8N614 296 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 Q8NA96 180 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 C7orf57Q8NEG2 295 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 OR9A2Q8NGT5 310 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 SUN3Q8TAQ9 357 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF75CPQ92670 426 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 KAT2AQ92830 837 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 METTL2AQ96IZ6 378 aaKnown RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 FCRL1Q96LA6 429 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 SIGLEC12Q96PQ1 595 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 UTP23Q9BRU9 249 aaKnown RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 SLC35C2Q9NQQ7 365 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 KLHL1Q9NR64 748 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 INTS9Q9NV88 658 aaKnown RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 EHD3Q9NZN3 535 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 BAHCC1Q9P281 2608 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 ZGRF1Q86YA3 2104 aa6.4□□□□□ -1.38
BRCA1-215ENST00000478531 USP9XQ93008 2570 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-215ENST00000478531 GOLGA8QA0A0J9YX86 632 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 GOLGA8OA6NCC3 632 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 NPIPB8E9PQR5 432 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 GOLGA8NF8WBI6 632 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 PDPK1O15530 556 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 SORBS2O94875 1100 aaKnown RBP6.4□□□□□ -1.39
BRCA1-215ENST00000478531 IGKV3-11P04433 115 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 PCSK2P16519 638 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 EFNA1P20827 205 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-215ENST00000478531 ASMTP46597 345 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 SSR4P51571 173 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 SLC37A1P57057 533 aa6.4□□□□□ -1.39
BRCA1-215ENST00000478531 TLE1Q04724 770 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms