RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 HPF1Q9NWY4 346 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 UTS2RQ9UKP6 389 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 ERVK-11Q9UQG0 969 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 TRAF6Q9Y4K3 522 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 DNAJC15Q9Y5T4 150 aa14.44□□□□□ -0.1
HMGA1-206ENST00000478214 USP9XQ93008 2570 aaPredicted RBP14.44□□□□□ -0.1
HMGA1-206ENST00000478214 SVILO95425 2214 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 POLEQ07864 2286 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 ASPDHA6ND91 283 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 SLC28A1O00337 649 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 SEC22BO75396 215 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 CHEK2O96017 543 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 FGF4P08620 206 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 LINC00032P0C843 101 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 DRD2P14416 443 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 CSNK2A2P19784 350 aaPredicted RBP14.43□□□□□ -0.1
HMGA1-206ENST00000478214 SERPINB5P36952 375 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 TDGF1P3P51864 188 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 ZNF763Q0D2J5 394 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 MGAT2Q10469 447 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 FUT7Q11130 342 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 ELOAQ14241 798 aaKnown RBP14.43□□□□□ -0.1
HMGA1-206ENST00000478214 HEPACAMQ14CZ8 416 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 EBPQ15125 230 aaKnown RBP14.43□□□□□ -0.1
HMGA1-206ENST00000478214 MPEG1Q2M385 716 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 UGT3A2Q3SY77 523 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 PIGGQ5H8A4 983 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 SH2D4BQ5SQS7 431 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 CES4AQ5XG92 561 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 NOXRED1Q6NXP6 359 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 FAM111BQ6SJ93 734 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 Q6ZSR9 355 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 SLC29A4Q7RTT9 530 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 NUDCD3Q8IVD9 361 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 CLYBLQ8N0X4 340 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 OR2T11Q8NH01 316 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 AGR3Q8TD06 166 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 EXOSC8Q96B26 276 aaKnown RBP14.43□□□□□ -0.1
HMGA1-206ENST00000478214 FRMD6Q96NE9 622 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 WWTR1Q9GZV5 400 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 LRTM1Q9HBL6 345 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 KCNK9Q9NPC2 374 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 ACTL7BQ9Y614 415 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 ZNF780BQ9Y6R6 833 aa14.43□□□□□ -0.1
HMGA1-206ENST00000478214 FLNBO75369 2602 aaKnown RBP14.43□□□□□ -0.1
HMGA1-206ENST00000478214 COL12A1Q99715 3063 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 OR6C76A6NM76 312 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 RGS14O43566 566 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 NADKO95544 446 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-206ENST00000478214 ATP1B1P05026 303 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 S1PR1P21453 382 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 PRPH2P23942 346 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 SOX18P35713 384 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 C2orf80Q0P641 193 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 MAP4K2Q12851 820 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 UBAP2LQ14157 1087 aaKnown RBP14.42□□□□□ -0.1
HMGA1-206ENST00000478214 KIAA0040Q15053 153 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 LTB4RQ15722 352 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 PRICKLE4Q2TBC4 344 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 C6orf163Q5TEZ5 329 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 RNF165Q6ZSG1 346 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 SULF2Q8IWU5 870 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 GPALPP1Q8IXQ4 340 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 DDIASQ8IXT1 998 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 LRRC25Q8N386 305 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-206ENST00000478214 VWA5B2Q8N398 1253 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 FAM26EQ8N5C1 309 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 CPSF7Q8N684 471 aaKnown RBP14.42□□□□□ -0.1
HMGA1-206ENST00000478214 ZNF615Q8N8J6 731 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 FAM98AQ8NCA5 519 aaKnown RBP14.42□□□□□ -0.1
HMGA1-206ENST00000478214 ADCY4Q8NFM4 1077 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 PPP1R14CQ8TAE6 165 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 FAM76AQ8TAV0 307 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.42□□□□□ -0.1
HMGA1-206ENST00000478214 TWIST2Q8WVJ9 160 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 BRINP2Q9C0B6 783 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 OR10A5Q9H207 317 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 TIMMDC1Q9NPL8 285 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 PFDN4Q9NQP4 134 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 C1orf109Q9NX04 203 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 MAT2BQ9NZL9 334 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 ZDHHC2Q9UIJ5 367 aa14.42□□□□□ -0.1
HMGA1-206ENST00000478214 KLF13Q9Y2Y9 288 aaPredicted RBP14.42□□□□□ -0.1
HMGA1-206ENST00000478214 NPIPB8E9PQR5 432 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 PIP5K1BO14986 540 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 TM9SF1O15321 606 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 PEX1O43933 1283 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 SEMA7AO75326 666 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 MYZAPP0CAP1 466 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 DHRS4L1P0CG22 281 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 NEFHP12036 1026 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 DDCP20711 480 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 TACR1P25103 407 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 GSTM5P46439 218 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 MEOX1P50221 254 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 KCNK10P57789 538 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 GPR85P60893 370 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 CHI3L2Q15782 390 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 PRSS53Q2L4Q9 553 aa14.41□□□□□ -0.1
HMGA1-206ENST00000478214 RNFT1Q5M7Z0 435 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms