RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 TNPO2O14787 897 aaKnown RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 RASGRF2O14827 1237 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 EIF3HO15372 352 aaKnown RBP eCLIP2.29□□□□□ -2.04
XRN1-211ENST00000477237 TGFB1I1O43294 461 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CALUO43852 315 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 TSPAN2O60636 221 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CTSVO60911 334 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 DNAJB6O75190 326 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 GMNNO75496 209 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CIB2O75838 187 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PDE5AO76074 875 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 RECQL5O94762 991 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 UFL1O94874 794 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 SIX3O95343 332 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 PLEKHA8P1O95397 391 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 F9P00740 461 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 AGTP01019 485 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 TRBC1P01850 177 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 NR3C1P04150 777 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 YES1P07947 543 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 KRT16P08779 473 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 STSP08842 583 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 OR4E1P0C645 316 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 IQCF3P0C7M6 154 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 OR8G3PP0DMU2 310 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 THRBP10828 461 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 SLC2A3P11169 496 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 FDPSP14324 419 aaKnown RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 ACADSP16219 412 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ERCC2P18074 760 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PRPS1L1P21108 318 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CPT2P23786 658 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 GNA11P29992 359 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CCND2P30279 289 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PKLRP30613 574 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 SERPINB1P30740 379 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 GCH1P30793 250 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ICAM3P32942 547 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CDH5P33151 784 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 FEN1P39748 380 aaKnown RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 HCAR3P49019 387 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 GNG10P50151 68 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 NPY4RP50391 375 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 P2RY4P51582 365 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 RIDAP52758 137 aaKnown RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 NKX2-5P52952 324 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 NME5P56597 212 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ACTBP60709 375 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PRPS1P60891 318 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ACTA2P62736 377 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 SKP1P63208 163 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ACTG1P63261 375 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ACTG2P63267 376 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ACTC1P68032 377 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ACTA1P68133 377 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 MRPS25P82663 173 aaKnown RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.29□□□□□ -2.04
XRN1-211ENST00000477237 SPOCK1Q08629 439 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 IFFO1Q0D2I5 559 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 GALNT2Q10471 571 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 OVGP1Q12889 678 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 SLAQ13239 276 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PEX6Q13608 980 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PTK6Q13882 451 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 IL18Q14116 193 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 VEZF1Q14119 521 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 DGCR6Q14129 220 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PIGHQ14442 188 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 PCLAFQ15004 111 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CEBPEQ15744 281 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 DECR1Q16698 335 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PRICKLE4Q2TBC4 344 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 HNRNPA1L2Q32P51 320 aaKnown RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 MOGAT2Q3SYC2 334 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 NADK2Q4G0N4 442 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 MPPE1Q53F39 396 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 FFAR4Q5NUL3 377 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ARMC12Q5T9G4 340 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 LRRC38Q5VT99 294 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 C1orf146Q5VVC0 180 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 SNRNP48Q6IEG0 339 aaKnown RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 OR5M10Q6IEU7 315 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ETFRF1Q6IPR1 90 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 KRT80Q6KB66 452 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 C3orf33Q6P1S2 294 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PSRC1Q6PGN9 363 aaPredicted RBP2.29□□□□□ -2.04
XRN1-211ENST00000477237 TSSK4Q6SA08 328 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 AFTPHQ6ULP2 937 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 CYP20A1Q6UW02 462 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 TMIGD1Q6UXZ0 262 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 NDUFAF7Q7L592 441 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 COPS6Q7L5N1 327 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 PAGE2Q7Z2X7 111 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 LHFPL4Q7Z7J7 247 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 LINC00523Q86TU6 105 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 LINC00346Q8IVM7 164 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 MISPQ8IVT2 679 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 NELFCDQ8IXH7 590 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 TIGD4Q8IY51 512 aa2.29□□□□□ -2.04
XRN1-211ENST00000477237 ENTHD1Q8IYW4 607 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms