RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PRR22Q8IZ63 422 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 MYO1HQ8N1T3 1032 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 FBXL8Q96CD0 374 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 LINGO1Q96FE5 620 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 TMEM41AQ96HV5 264 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 FBXL20Q96IG2 436 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 DGAT2Q96PD7 388 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 TNFRSF13CQ96RJ3 184 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 ERVK-6Q9BXR3 956 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 L2HGDHQ9H9P8 463 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 PRDM7Q9NQW5 492 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 IKZF3Q9UKT9 509 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 ERVK-19Q9WJR5 959 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 SLC22A14Q9Y267 594 aa13.85□□□□□ -0.19
SMG5-204ENST00000476954 FAM234BA2RU67 622 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 CLPSP04118 112 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 COX7A2P14406 83 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 CHMP24386 653 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 SLC6A12P48065 614 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 IGLV3-21P80748 117 aaPredicted RBP13.84□□□□□ -0.19
SMG5-204ENST00000476954 VLDLRP98155 873 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 FUT7Q11130 342 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 EXOC3L2Q2M3D2 409 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 ADPRMQ3LIE5 342 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 ENPP6Q6UWR7 440 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 ZNF793Q6ZN11 406 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 SLC29A4Q7RTT9 530 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 MEX3DQ86XN8 651 aaKnown RBP13.84□□□□□ -0.19
SMG5-204ENST00000476954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.84□□□□□ -0.19
SMG5-204ENST00000476954 OR1J4Q8NGS1 313 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 OR14L1PQ8NHC6 308 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 C1orf54Q8WWF1 131 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 CAVIN3Q969G5 261 aa13.84□□□□□ -0.19
SMG5-204ENST00000476954 ZNF845Q96IR2 970 aaPredicted RBP13.84□□□□□ -0.19
SMG5-204ENST00000476954 COPS7BQ9H9Q2 264 aaPredicted RBP13.84□□□□□ -0.19
SMG5-204ENST00000476954 A0A088AWK7 358 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 TCRBV7S3A2A0A539 114 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 SLC35F4A4IF30 521 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 UBFD1O14562 309 aaKnown RBP13.83□□□□□ -0.2
SMG5-204ENST00000476954 LMX1BO60663 402 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 CRHP06850 196 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 ZNF10P21506 573 aaPredicted RBP13.83□□□□□ -0.2
SMG5-204ENST00000476954 TCEA1P23193 301 aaKnown RBP13.83□□□□□ -0.2
SMG5-204ENST00000476954 RGS4P49798 205 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 TERF1P54274 439 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 GFRA1P56159 465 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 SLC37A1P57057 533 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 SLBPQ14493 270 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMG5-204ENST00000476954 ZNF267Q14586 743 aaPredicted RBP13.83□□□□□ -0.2
SMG5-204ENST00000476954 FAM174BQ3ZCQ3 159 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 PDLIM3Q53GG5 364 aaPredicted RBP13.83□□□□□ -0.2
SMG5-204ENST00000476954 LIPNQ5VXI9 398 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 ALKBH2Q6NS38 261 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 TRIM40Q6P9F5 258 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 RNF111Q6ZNA4 994 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 FIG4Q92562 907 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 ZNF669Q96BR6 464 aaPredicted RBP13.83□□□□□ -0.2
SMG5-204ENST00000476954 F2RL3Q96RI0 385 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 RHNO1Q9BSD3 238 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 PHACTR1Q9C0D0 580 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 OR2B2Q9GZK3 357 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 REXO4Q9GZR2 422 aaKnown RBP13.83□□□□□ -0.2
SMG5-204ENST00000476954 CHODLQ9H9P2 273 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 WWOXQ9NZC7 414 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 PAK5Q9P286 719 aa13.83□□□□□ -0.2
SMG5-204ENST00000476954 NOTCH1P46531 2555 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 IQANK1A0A1B0GTG1 560 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 CDC7O00311 574 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 RTCAO00442 366 aaKnown RBP13.82□□□□□ -0.2
SMG5-204ENST00000476954 IGHV4-31P0DP07 118 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 ZNF708P17019 499 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 GCKP35557 465 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 GMPRP36959 345 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 TPM4P67936 248 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 BASP1P80723 227 aaKnown RBP13.82□□□□□ -0.2
SMG5-204ENST00000476954 THOC5Q13769 683 aaKnown RBP13.82□□□□□ -0.2
SMG5-204ENST00000476954 DHX34Q14147 1143 aaKnown RBP13.82□□□□□ -0.2
SMG5-204ENST00000476954 RCN2Q14257 317 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 FAM120AOSQ5T036 256 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 LRRC8EQ6NSJ5 796 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 TMIGD1Q6UXZ0 262 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 UBE3DQ7Z6J8 389 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 TAGAPQ8N103 731 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 LRRC57Q8N9N7 239 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 SMAP2Q8WU79 429 aaPredicted RBP13.82□□□□□ -0.2
SMG5-204ENST00000476954 LCORQ96JN0 433 aaPredicted RBP13.82□□□□□ -0.2
SMG5-204ENST00000476954 HS6ST2Q96MM7 605 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 GALNT9Q9HCQ5 603 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 RNF112Q9ULX5 631 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 DLGAP4Q9Y2H0 992 aa13.82□□□□□ -0.2
SMG5-204ENST00000476954 GRID2IPA4D2P6 1211 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 SLC22A20A6NK97 555 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 WASHC1A8K0Z3 465 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 CLOCKO15516 846 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 OR10H2O60403 315 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 PRKRAO75569 313 aaKnown RBP13.81□□□□□ -0.2
SMG5-204ENST00000476954 C1GALT1C1LP0DN25 315 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 PTNP21246 168 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 PTGDSP41222 190 aa13.81□□□□□ -0.2
SMG5-204ENST00000476954 NAP1L1P55209 391 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms