RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TP53BP2Q13625 1128 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 MAPK11Q15759 364 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 MLF2Q15773 248 aaPredicted RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 ZNF404Q494X3 552 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 TMEM236Q5W0B7 351 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 ADCK2Q7Z695 626 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D19Q8N5T2 526 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 AMER2Q8N7J2 671 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 MCFD2Q8NI22 146 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 SIPA1Q96FS4 1042 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 SLC35G5Q96KT7 338 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 Q96MT0 163 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 DPH7Q9BTV6 452 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 SPATA5L1Q9BVQ7 753 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 BTBD2Q9BX70 525 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 C1QTNF2Q9BXJ5 285 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 ALOXE3Q9BYJ1 711 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 MVB12BQ9H7P6 319 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 FZD3Q9NPG1 666 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 NDOR1Q9UHB4 597 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 DAPK2Q9UIK4 370 aa15.56■□□□□ 0.08
TMEM53-208ENST00000476724 PNMA8BQ9ULN7 279 aaPredicted RBP15.56■□□□□ 0.08
TMEM53-208ENST00000476724 SLC28A2O43868 658 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 FUCA1P04066 466 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 BMP4P12644 408 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 ELAVL4P26378 380 aaKnown RBP15.55■□□□□ 0.08
TMEM53-208ENST00000476724 PKLRP30613 574 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 CNR2P34972 360 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 SNRPGP62308 76 aaKnown RBP15.55■□□□□ 0.08
TMEM53-208ENST00000476724 PPP2CBP62714 309 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 RPS21P63220 83 aaKnown RBP15.55■□□□□ 0.08
TMEM53-208ENST00000476724 PPP2CAP67775 309 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 SGCGQ13326 291 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 GNA13Q14344 377 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 SLC9A5Q14940 896 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 ZIC1Q15915 447 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TMEM31Q5JXX7 168 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 NDUFAF5Q5TEU4 345 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TUBA3EQ6PEY2 450 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 BHLHB9Q6PI77 547 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TMEM64Q6YI46 380 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 LINC00471Q8N535 108 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 KBTBD8Q8NFY9 601 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 MRGPRX1Q96LB2 322 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 DSN1Q9H410 356 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 OSGEPL1Q9H4B0 414 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 SLC35C2Q9NQQ7 365 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 C5AR2Q9P296 337 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 GPC6Q9Y625 555 aaPredicted RBP15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3DA0A087WVF3 549 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3IA0A087WXS9 549 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3EA0A087X179 549 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3KA0A087X1G2 549 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TRBV4-1A0A0J9YWV2 114 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3FA6NER0 549 aaPredicted RBP15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3LB9A6J9 549 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 ALOX5P09917 674 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3HP0C7X1 549 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 GADD45AP24522 165 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 CD40LGP29965 261 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 NTSP30990 170 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 GPC1P35052 558 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 RGS6P49758 472 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 PPP5CP53041 499 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 UGT2B15P54855 530 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 CCINQ13939 588 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 KRT33BQ14525 404 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 ARMCX4Q5H9R4 360 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3GQ6DHY5 549 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3CQ6IPX1 549 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 BTLAQ7Z6A9 289 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TBC1D3Q8IZP1 549 aaPredicted RBP15.55■□□□□ 0.08
TMEM53-208ENST00000476724 FAM3CQ92520 227 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 AMDHD1Q96NU7 426 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 TREX2Q9BQ50 279 aaPredicted RBP15.55■□□□□ 0.08
TMEM53-208ENST00000476724 SLC17A9Q9BYT1 436 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 BTBD1Q9H0C5 482 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 OR51I1Q9H343 314 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 GLIPR2Q9H4G4 154 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 FBRSQ9HAH7 460 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 BCL2L10Q9HD36 194 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 MRPS30Q9NP92 439 aaKnown RBP15.55■□□□□ 0.08
TMEM53-208ENST00000476724 SEMA3GQ9NS98 782 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 REV1Q9UBZ9 1251 aa15.55■□□□□ 0.08
TMEM53-208ENST00000476724 IGKV1-8A0A0C4DH67 115 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 KDM1AO60341 852 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 SLITRK5O94991 958 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 SERPIND1P05546 499 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 NDUFV2P19404 249 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 IGFALSP35858 605 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 AHRP35869 848 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 SLC15A1P46059 708 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 PSMD7P51665 324 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.54■□□□□ 0.08
TMEM53-208ENST00000476724 TIMM50Q3ZCQ8 353 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 PLAG1Q6DJT9 500 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 SRFBP1Q8NEF9 429 aaKnown RBP15.54■□□□□ 0.08
TMEM53-208ENST00000476724 BBS10Q8TAM1 723 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 SFXN5Q8TD22 340 aa15.54■□□□□ 0.08
TMEM53-208ENST00000476724 MOAP1Q96BY2 351 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms