RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SH3BP4Q9P0V3 963 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 ABI3Q9P2A4 366 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 ZNF223Q9UK11 482 aaPredicted RBP27.51■■□□□ 1.99
HOXB3-208ENST00000476342 BOD1L1Q8NFC6 3051 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 CHD6Q8TD26 2715 aa27.51■■□□□ 1.99
HOXB3-208ENST00000476342 K7EM74 188 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 SCAMP2O15127 329 aaKnown RBP27.5■■□□□ 1.99
HOXB3-208ENST00000476342 DIAPH2O60879 1101 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 ZFAND5O76080 213 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 IGKV3-11P04433 115 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 PRPS1L1P21108 318 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 DIO3P55073 304 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 DUSP2Q05923 314 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 MEP1AQ16819 746 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 PRICKLE4Q2TBC4 344 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 IGFL2Q6UWQ7 119 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 LINC00696Q6ZRV3 163 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 VWA5B2Q8N398 1253 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 ZNF321PQ8N8H1 164 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 CEP70Q8NHQ1 597 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 PRPF18Q99633 342 aaKnown RBP27.5■■□□□ 1.99
HOXB3-208ENST00000476342 TLN1Q9Y490 2541 aaKnown RBP27.5■■□□□ 1.99
HOXB3-208ENST00000476342 MYO1GB0I1T2 1018 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 PDPK1O15530 556 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 DPM1O60762 260 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 EDF1O60869 148 aaKnown RBP27.5■■□□□ 1.99
HOXB3-208ENST00000476342 GUCY1A3Q02108 690 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 MAP4K2Q12851 820 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 ACER2Q5QJU3 275 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 EPGNQ6UW88 154 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 IGFL3Q6UXB1 125 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 RNF111Q6ZNA4 994 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 ACAD11Q709F0 780 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 RPS19BP1Q86WX3 136 aaKnown RBP27.5■■□□□ 1.99
HOXB3-208ENST00000476342 DOK4Q8TEW6 326 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 BBC3Q96PG8 261 aaPredicted RBP27.5■■□□□ 1.99
HOXB3-208ENST00000476342 ATP6V1HQ9UI12 483 aa27.5■■□□□ 1.99
HOXB3-208ENST00000476342 BSNQ9UPA5 3926 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 HRKO00198 91 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 CT62P0C5K7 136 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 NCBP2P52298 156 aaKnown RBP eCLIP27.49■■□□□ 1.99
HOXB3-208ENST00000476342 CLDN8P56748 225 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 FCRLBQ6BAA4 426 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 ANKRD26P1Q6NSI1 321 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 ZADH2Q8N4Q0 377 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 SUN3Q8TAQ9 357 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 ZNF675Q8TD23 568 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 CDCP1Q9H5V8 836 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 ATAD3AQ9NVI7 634 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 STMN3Q9NZ72 180 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 MAT2BQ9NZL9 334 aa27.49■■□□□ 1.99
HOXB3-208ENST00000476342 GABRR3A8MPY1 467 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 POLR3GO15318 223 aaPredicted RBP27.48■■□□□ 1.99
HOXB3-208ENST00000476342 MDH1P40925 334 aaKnown RBP27.48■■□□□ 1.99
HOXB3-208ENST00000476342 C21orf58P58505 322 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 RNF4P78317 190 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 FUT7Q11130 342 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 PRSS53Q2L4Q9 553 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 ADCY4Q8NFM4 1077 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 OR7G1Q8NGA0 311 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 OR5L2Q8NGL0 311 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 ZFP28Q8NHY6 868 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 DPY30Q9C005 99 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 CCDC134Q9H6E4 229 aa27.48■■□□□ 1.99
HOXB3-208ENST00000476342 ZBTB20Q9HC78 741 aaPredicted RBP27.48■■□□□ 1.99
HOXB3-208ENST00000476342 CNTRLQ7Z7A1 2325 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 DYTNA2CJ06 578 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 OR6C76A6NM76 312 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 FCHO1O14526 889 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 SLITRK5O94991 958 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 ALDOCP09972 364 aaKnown RBP27.47■■□□□ 1.99
HOXB3-208ENST00000476342 AQP5P55064 265 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 SLC37A1P57057 533 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 LTB4RQ15722 352 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 SLC29A4Q7RTT9 530 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 ARMC10Q8N2F6 343 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 NATD1Q8N6N6 113 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 OR9A2Q8NGT5 310 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 THAP3Q8WTV1 239 aaPredicted RBP27.47■■□□□ 1.99
HOXB3-208ENST00000476342 ERP27Q96DN0 273 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 ZBED6CLQ96FA7 236 aaPredicted RBP27.47■■□□□ 1.99
HOXB3-208ENST00000476342 AIG1Q9NVV5 245 aa27.47■■□□□ 1.99
HOXB3-208ENST00000476342 SSTR4P31391 388 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 PTGER1P34995 402 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 LSM12Q3MHD2 195 aaKnown RBP27.46■■□□□ 1.99
HOXB3-208ENST00000476342 ZNF385BQ569K4 471 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 ZNF628Q5EBL2 1059 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 CPTPQ5TA50 214 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 FAM111BQ6SJ93 734 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 RIMKLAQ8IXN7 391 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 KRTCAP2Q8N6L1 136 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 NUBPLQ8TB37 319 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 CTHRC1Q96CG8 243 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 AMDHD1Q96NU7 426 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 OR52B2Q96RD2 323 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 NPAS2Q99743 824 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 SIKE1Q9BRV8 207 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 RNF32Q9H0A6 362 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 OR10A5Q9H207 317 aa27.46■■□□□ 1.99
HOXB3-208ENST00000476342 TCF7L2Q9NQB0 619 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms