RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 MKS1Q9NXB0 559 aa12.18□□□□□ -0.46
NIPAL3-206ENST00000475663 MCM8Q9UJA3 840 aa12.18□□□□□ -0.46
NIPAL3-206ENST00000475663 LRRK2Q5S007 2527 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 SETXQ7Z333 2677 aaKnown RBP12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 C1orf226A1L170 272 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 WDR91A4D1P6 747 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 SYNDIG1LA6NDD5 238 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 GUCY1B2O75343 617 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 ANXA4P09525 319 aaPredicted RBP12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 CCL3P10147 92 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 ARRB2P32121 409 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 SOX18P35713 384 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 EBPQ15125 230 aaKnown RBP12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 NNATQ16517 81 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 PIGGQ5H8A4 983 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 CEP85LQ5SZL2 805 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 LYPD8Q6UX82 237 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 SLC29A4Q7RTT9 530 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 PRR22Q8IZ63 422 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 FAM98AQ8NCA5 519 aaKnown RBP12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 OR5L2Q8NGL0 311 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 OR2T11Q8NH01 316 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 CNRIP1Q96F85 164 aaPredicted RBP12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 ART5Q96L15 291 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 ZIM3Q96PE6 472 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 PELOQ9BRX2 385 aaKnown RBP12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 TMEM109Q9BVC6 243 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 WWTR1Q9GZV5 400 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 TUBB1Q9H4B7 451 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 TIMMDC1Q9NPL8 285 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 GIMAP2Q9UG22 337 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 UTS2RQ9UKP6 389 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 SLC5A6Q9Y289 635 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 DTX4Q9Y2E6 619 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 KLF13Q9Y2Y9 288 aaPredicted RBP12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 PCDHGB6Q9Y5F9 930 aa12.17□□□□□ -0.46
NIPAL3-206ENST00000475663 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 TRGV8A0A0C4DH27 118 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 CCDC151A5D8V7 595 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 FAM166BA8MTA8 275 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 AZIN1O14977 448 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 RGS16O15492 202 aaPredicted RBP12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 TYROBPO43914 113 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 HS6ST1O60243 411 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 PDE9AO76083 593 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 LINC00032P0C843 101 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 UROSP10746 265 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 ZNF24P17028 368 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 S1PR1P21453 382 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 PIGAP37287 484 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 DNASE1L1P49184 302 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 MRPS35P82673 323 aaKnown RBP12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 MGAT2Q10469 447 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 DUSP8Q13202 625 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 BIKQ13323 160 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 TRMT12Q53H54 448 aaKnown RBP12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 SPIN4Q56A73 249 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 ARL13AQ5H913 290 aaPredicted RBP12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 PRAMEF20Q5VT98 475 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 CES4AQ5XG92 561 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 SIAH3Q8IW03 269 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 CCDC116Q8IYX3 515 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 CNPY4Q8N129 248 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 OR8K3Q8NH51 312 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 NUBPLQ8TB37 319 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 KAT2AQ92830 837 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 GFM2Q969S9 779 aaKnown RBP12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 C11orf24Q96F05 449 aaPredicted RBP12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 GPR137Q96N19 417 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 PSMG3-AS1Q96PY0 264 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 FAIM2Q9BWQ8 316 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 DEFB127Q9H1M4 99 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 ZNF395Q9H8N7 513 aaPredicted RBP12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 MAT2BQ9NZL9 334 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 BCAP29Q9UHQ4 241 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 CCL27Q9Y4X3 112 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 SVILO95425 2214 aa12.16□□□□□ -0.46
NIPAL3-206ENST00000475663 C2orf92A0A1B0GVN3 265 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 GOLGA6L10A6NI86 522 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 KLRC4-KLRK1H3BQV0 150 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 TFECO14948 347 aaPredicted RBP12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 ASNA1O43681 348 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 CDC40O60508 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 SEC22BO75396 215 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 LYPLA1O75608 230 aaPredicted RBP12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 LDLRP01130 860 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 PCSK2P16519 638 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 CSNK2A2P19784 350 aaPredicted RBP12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 TACR1P25103 407 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 TRA2BP62995 288 aaKnown RBP12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 PLGLB1Q02325 96 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 C2orf80Q0P641 193 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 FUT7Q11130 342 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 C3AR1Q16581 482 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 MPEG1Q2M385 716 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 PRICKLE4Q2TBC4 344 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 C6orf163Q5TEZ5 329 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 KANK2Q63ZY3 851 aa12.15□□□□□ -0.46
NIPAL3-206ENST00000475663 DESI1Q6ICB0 168 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms