RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 OR1A2Q9Y585 309 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 IKBKGQ9Y6K9 419 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 SLC9B1P1A6NJY1 282 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 VEGFDO43915 354 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 GLCEO94923 617 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 REC8O95072 547 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 SLC16A8O95907 504 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 HEXBP07686 556 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 TPM2P07951 284 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 TRA2BP62995 288 aaKnown RBP4.76□□□□□ -1.65
SMC5-203ENST00000475540 GABPAQ06546 454 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 MFGE8Q08431 387 aaPredicted RBP4.76□□□□□ -1.65
SMC5-203ENST00000475540 KLHL30Q0D2K2 578 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 HFEQ30201 348 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 TIMM50Q3ZCQ8 353 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 SLC22A6Q4U2R8 563 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 PRR30Q53SZ7 412 aaPredicted RBP4.76□□□□□ -1.65
SMC5-203ENST00000475540 C17orf64Q86WR6 236 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 SIAH3Q8IW03 269 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 GVQW1Q8N7I0 195 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 CNNM3Q8NE01 707 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 ST7LQ8TDW4 575 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 ESAMQ96AP7 390 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 C16orf58Q96GQ5 468 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 HSD3B7Q9H2F3 369 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 DPEP3Q9H4B8 488 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 ELL3Q9HB65 397 aaPredicted RBP4.76□□□□□ -1.65
SMC5-203ENST00000475540 NINJ2Q9NZG7 142 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 HMG20BQ9P0W2 317 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 ARMCX1Q9P291 453 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 AP1M2Q9Y6Q5 423 aa4.76□□□□□ -1.65
SMC5-203ENST00000475540 TRAV9-2A0A087WT02 112 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 A0A1W2PQ72 361 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 SMIM30A4D0T7 59 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 FAM149AA5PLN7 773 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 E2F3O00716 465 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 CHUKO15111 745 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 LRRTM2O43300 516 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 DUSP11O75319 330 aaKnown RBP4.75□□□□□ -1.65
SMC5-203ENST00000475540 ZNF253O75346 499 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 CSDE1O75534 798 aaKnown RBP4.75□□□□□ -1.65
SMC5-203ENST00000475540 DUX4L4P0CJ87 422 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 UMPSP11172 480 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 GLRA1P23415 457 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 PPP2R1BP30154 601 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 TKTL1P51854 596 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 CASP9P55211 416 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 ABRAXAS2Q15018 415 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 ANKDD1AQ495B1 522 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 HSP90AA5PQ58FG0 334 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 CASC1Q6TDU7 716 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 OLFM4Q6UX06 510 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 ZNF600Q6ZNG1 722 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 ICA1LQ8NDH6 482 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 GGHQ92820 318 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 SYAP1Q96A49 352 aaPredicted RBP4.75□□□□□ -1.65
SMC5-203ENST00000475540 PCED1BQ96HM7 432 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 RAB40CQ96S21 281 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 SSX3Q99909 188 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.75□□□□□ -1.65
SMC5-203ENST00000475540 FBXW2Q9UKT8 454 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 RPH3AQ9Y2J0 694 aaPredicted RBP4.75□□□□□ -1.65
SMC5-203ENST00000475540 ATAD2BQ9ULI0 1458 aa4.75□□□□□ -1.65
SMC5-203ENST00000475540 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 RGSL1A5PLK6 1076 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 RNF212BA8MTL3 300 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 ZNF487B1APH4 448 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 HAT1O14929 419 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 NME6O75414 186 aaPredicted RBP4.74□□□□□ -1.65
SMC5-203ENST00000475540 AKAP3O75969 853 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 ALPPP05187 535 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 ALPPL2P10696 532 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 HSD17B1P14061 328 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 CCNA2P20248 432 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 OR1D2P34982 312 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 ATXN3P54252 364 aaPredicted RBP4.74□□□□□ -1.65
SMC5-203ENST00000475540 HMGCS2P54868 508 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 RPL27P61353 136 aaKnown RBP4.74□□□□□ -1.65
SMC5-203ENST00000475540 EMC2Q15006 297 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 PDK1Q15118 436 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 NHLRC1Q6VVB1 395 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 SFRP1Q8N474 314 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 ZNF540Q8NDQ6 660 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 TRPV3Q8NET8 790 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 GOLGA5Q8TBA6 731 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 SLC13A3Q8WWT9 602 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 MRPL24Q96A35 216 aaKnown RBP4.74□□□□□ -1.65
SMC5-203ENST00000475540 FAM111AQ96PZ2 611 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 ZBP1Q9H171 429 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 AKIRIN1Q9H9L7 192 aaPredicted RBP4.74□□□□□ -1.65
SMC5-203ENST00000475540 POLE3Q9NRF9 147 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 DUSP12Q9UNI6 340 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 RABL2BQ9UNT1 228 aa4.74□□□□□ -1.65
SMC5-203ENST00000475540 SYNJ2BP-COX16A0A087WUM0 186 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 C13orf42A0A1B0GVH6 325 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 H0YIG0 161 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 K7EPI3 171 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 TRIM16O95361 564 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 EPOP01588 193 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms