RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 STSP08842 583 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 UROSP10746 265 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 CSNK2A2P19784 350 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-223ENST00000475146 EBPQ15125 230 aaKnown RBP22.22■■□□□ 1.15
CPNE1-223ENST00000475146 KRTCAP3Q53RY4 240 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 CLEC6AQ6EIG7 209 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 C16orf78Q8WTQ4 265 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 PSMG3-AS1Q96PY0 264 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 MECRQ9BV79 373 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 BRINP2Q9C0B6 783 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 RRAGDQ9NQL2 400 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-223ENST00000475146 HEY2Q9UBP5 337 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 UTS2RQ9UKP6 389 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 FIS1Q9Y3D6 152 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 ZNF780BQ9Y6R6 833 aa22.22■■□□□ 1.15
CPNE1-223ENST00000475146 FLNBO75369 2602 aaKnown RBP22.22■■□□□ 1.15
CPNE1-223ENST00000475146 TRGV8A0A0C4DH27 118 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 G3V3Y1 287 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 LDLRP01130 860 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 TUBBP07437 444 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 ANXA4P09525 319 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-223ENST00000475146 PTGER1P34995 402 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 PER3P56645 1201 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 ZNF844Q08AG5 666 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 RNFT1Q5M7Z0 435 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 HLA-DQA1Q5Y7H0 255 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 FAM180BQ6P0A1 224 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 SIAH3Q8IW03 269 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 VWA5B2Q8N398 1253 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 GOLM1Q8NBJ4 401 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 CDC26Q8NHZ8 85 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 MAGED4Q96JG8 741 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 SGCZQ96LD1 299 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 TRMOQ9BU70 441 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 DEPPQ9NTK1 212 aa22.21■■□□□ 1.15
CPNE1-223ENST00000475146 ASH1LQ9NR48 2969 aaKnown RBP22.2■■□□□ 1.15
CPNE1-223ENST00000475146 USP9XQ93008 2570 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-223ENST00000475146 A0A1B0GUH1 482 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 C2orf92A0A1B0GVN3 265 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 AZIN1O14977 448 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 RGS16O15492 202 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-223ENST00000475146 ASNA1O43681 348 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 NADKO95544 446 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-223ENST00000475146 DRD2P14416 443 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 CREB1P16220 341 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 FUT7Q11130 342 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 HEPACAMQ14CZ8 416 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 GALNT18Q6P9A2 607 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 TRIM46Q7Z4K8 759 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 FJX1Q86VR8 437 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 LRRC25Q8N386 305 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-223ENST00000475146 CNRIP1Q96F85 164 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-223ENST00000475146 OR10A5Q9H207 317 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 SENP1Q9P0U3 644 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 SH3BGRL2Q9UJC5 107 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 PTPN13Q12923 2485 aa22.2■■□□□ 1.14
CPNE1-223ENST00000475146 RSL1D1O76021 490 aaKnown RBP22.19■■□□□ 1.14
CPNE1-223ENST00000475146 P04436 131 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 ATP1B1P05026 303 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 PLGLB1Q02325 96 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 DUSP2Q05923 314 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 ZNF763Q0D2J5 394 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.19■■□□□ 1.14
CPNE1-223ENST00000475146 FAM111BQ6SJ93 734 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 GHDCQ8N2G8 530 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 SLC15A4Q8N697 577 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 ZFP62Q8NB50 900 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-223ENST00000475146 ADCY4Q8NFM4 1077 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 OR2M7Q8NG81 312 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 OR7G1Q8NGA0 311 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 EXOSC8Q96B26 276 aaKnown RBP22.19■■□□□ 1.14
CPNE1-223ENST00000475146 SPACA9Q96E40 222 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-223ENST00000475146 C11orf24Q96F05 449 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-223ENST00000475146 SACM1LQ9NTJ5 587 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 GIMAP4Q9NUV9 329 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 SIRT5Q9NXA8 310 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 MAT2BQ9NZL9 334 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 ENTPD4Q9Y227 616 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 POLR3HQ9Y535 204 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-223ENST00000475146 PTGDR2Q9Y5Y4 395 aa22.19■■□□□ 1.14
CPNE1-223ENST00000475146 A0A0G2JMM0 328 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 A0A1W2PPB8 328 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 A0A1W2PRS3 328 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 A1L4Q6 167 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 KIR3DP1A8MWS1 328 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 NPHS1O60500 1241 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 SLC19A2O60779 497 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 CHEK2O96017 543 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 CHRNGP07510 517 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 CCL3P10147 92 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 GSTM5P46439 218 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 NR0B1P51843 470 aaKnown RBP22.18■■□□□ 1.14
CPNE1-223ENST00000475146 CASP6P55212 293 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 LTB4RQ15722 352 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 PRICKLE4Q2TBC4 344 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 ZNF791Q3KP31 576 aaPredicted RBP22.18■■□□□ 1.14
CPNE1-223ENST00000475146 LYPD8Q6UX82 237 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 GK5Q6ZS86 529 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 ZCCHC23Q6ZST2 131 aa22.18■■□□□ 1.14
CPNE1-223ENST00000475146 TAGAPQ8N103 731 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms