RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 VPS29Q9UBQ0 182 aa12.59□□□□□ -0.39
SPCS1-204ENST00000474945 ZNF835Q9Y2P0 537 aa12.59□□□□□ -0.39
SPCS1-204ENST00000474945 PCDHA9Q9Y5H5 950 aa12.59□□□□□ -0.39
SPCS1-204ENST00000474945 A0A1B0GTH9 108 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 GNG14A0A1W2PPG7 69 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 G3V2L1 256 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 COPEO14579 308 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 PCDH7O60245 1069 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 CDH16O75309 829 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 ULK1O75385 1050 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 ERAL1O75616 437 aaKnown RBP12.58□□□□□ -0.4
SPCS1-204ENST00000474945 PDE9AO76083 593 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 NADKO95544 446 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-204ENST00000474945 PROCP04070 461 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 CLPSP04118 112 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 TPOP07202 933 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 CHN1P15882 459 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 PTGS2P35354 604 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 DNASE1L1P49184 302 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 HMGCS1Q01581 520 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 CCDC153Q494R4 210 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 CFAP157Q5JU67 520 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 PRAMEF20Q5VT98 475 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 C3P1Q6ZMU1 363 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 Q6ZPB1 254 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-204ENST00000474945 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 SLC22A16Q86VW1 577 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 TDRPQ86YL5 185 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 TAGAPQ8N103 731 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 C4orf33Q8N1A6 199 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 VWA5B2Q8N398 1253 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 ZNF808Q8N4W9 903 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-204ENST00000474945 GBP7Q8N8V2 638 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-204ENST00000474945 OR10G3Q8NGC4 313 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 OR52N2Q8NGI0 321 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 OR5M3Q8NGP4 307 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 C16orf52Q8NHV5 167 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPCS1-204ENST00000474945 EBPLQ9BY08 206 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 BRINP2Q9C0B6 783 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 DEFB127Q9H1M4 99 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 ANKZF1Q9H8Y5 726 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 MCM8Q9UJA3 840 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 MEMO1Q9Y316 297 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 TIMM22Q9Y584 194 aa12.58□□□□□ -0.4
SPCS1-204ENST00000474945 C2orf92A0A1B0GVN3 265 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 PLIN3O60664 434 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 LRATO95237 230 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 IL3P08700 152 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 CT62P0C5K7 136 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 PORP16435 677 aaPredicted RBP12.57□□□□□ -0.4
SPCS1-204ENST00000474945 KRT4P19013 534 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 FEN1P39748 380 aaKnown RBP12.57□□□□□ -0.4
SPCS1-204ENST00000474945 CCT5P48643 541 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 NR0B1P51843 470 aaKnown RBP12.57□□□□□ -0.4
SPCS1-204ENST00000474945 SMSP52788 366 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 VSNL1P62760 191 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 KCNJ2P63252 427 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 ADORA2A-AS1P86434 159 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 ACSM2AQ08AH3 577 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 IMPG1Q17R60 797 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 SPIN4Q56A73 249 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 ACSM2BQ68CK6 577 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 ARHGAP11AQ6P4F7 1023 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 SCIMPQ6UWF3 145 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 RGS9BPQ6ZS82 235 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 FRMD7Q6ZUT3 714 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 NCCRP1Q6ZVX7 275 aaPredicted RBP12.57□□□□□ -0.4
SPCS1-204ENST00000474945 CHERPQ8IWX8 916 aaKnown RBP12.57□□□□□ -0.4
SPCS1-204ENST00000474945 DND1Q8IYX4 353 aaKnown RBP12.57□□□□□ -0.4
SPCS1-204ENST00000474945 EID3Q8N140 333 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 FBXW8Q8N3Y1 598 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 FAM109AQ8N4B1 249 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 SLC15A4Q8N697 577 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 CDC26Q8NHZ8 85 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 FAM57AQ8TBR7 257 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 TM4SF18Q96CE8 201 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 IQCGQ9H095 443 aaKnown RBP12.57□□□□□ -0.4
SPCS1-204ENST00000474945 OR10A5Q9H207 317 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 IL1RL2Q9HB29 575 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 TUBA8Q9NY65 449 aaPredicted RBP12.57□□□□□ -0.4
SPCS1-204ENST00000474945 UTS2RQ9UKP6 389 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 ZNF780BQ9Y6R6 833 aa12.57□□□□□ -0.4
SPCS1-204ENST00000474945 TLDC2A0PJX2 215 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 GLSO94925 669 aaPredicted RBP12.56□□□□□ -0.4
SPCS1-204ENST00000474945 FBXO45P0C2W1 286 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 CSNK2A2P19784 350 aaPredicted RBP12.56□□□□□ -0.4
SPCS1-204ENST00000474945 CNR1P21554 472 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 SERPINB3P29508 390 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 TIA1P31483 386 aaKnown RBP eCLIP12.56□□□□□ -0.42e-18■■■■■ 62.8
SPCS1-204ENST00000474945 CRHR1P34998 444 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 PIGAP37287 484 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 MAGEA5P43359 124 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 NRG3P56975 720 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 TRA2BP62995 288 aaKnown RBP12.56□□□□□ -0.4
SPCS1-204ENST00000474945 BTKQ06187 659 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 IFFO1Q0D2I5 559 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 NNATQ16517 81 aa12.56□□□□□ -0.4
SPCS1-204ENST00000474945 ZNF791Q3KP31 576 aaPredicted RBP12.56□□□□□ -0.4
SPCS1-204ENST00000474945 SPDYAQ5MJ70 313 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms