RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 TCHHL1Q5QJ38 904 aaPredicted RBP17.1■□□□□ 0.33
COL7A1-209ENST00000474432 SLC22A10Q63ZE4 541 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 TTC19Q6DKK2 380 aaPredicted RBP17.1■□□□□ 0.33
COL7A1-209ENST00000474432 TMEM64Q6YI46 380 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 TRMT10CQ7L0Y3 403 aaKnown RBP17.1■□□□□ 0.33
COL7A1-209ENST00000474432 COMMD6Q7Z4G1 85 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 FAM109AQ8N4B1 249 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 LRRN4CLQ8ND94 238 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 OR10G3Q8NGC4 313 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 SDCCAG3Q96C92 435 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 GAL3ST4Q96RP7 486 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 WDR41Q9HAD4 459 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 PNPLA3Q9NST1 481 aa17.1■□□□□ 0.33
COL7A1-209ENST00000474432 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL7A1-209ENST00000474432 CNOT11Q9UKZ1 510 aaKnown RBP17.1■□□□□ 0.33
COL7A1-209ENST00000474432 CSMD2Q7Z408 3487 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 POLQO75417 2590 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 LRRC3CA6NJW4 275 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 OR6C76A6NM76 312 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 NPIPA2E9PIF3 369 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 NPIPA3F8WFD2 350 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 KIF2AO00139 706 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-209ENST00000474432 ACOT7O00154 380 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 OTCP00480 354 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 ENDOUP21128 410 aaKnown RBP17.09■□□□□ 0.33
COL7A1-209ENST00000474432 XKP51811 444 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 CLCQ05315 142 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 ZNF678Q5SXM1 525 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 CCNYL2Q5T2Q4 361 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 SLC29A4Q7RTT9 530 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 FBXW8Q8N3Y1 598 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 OR4K14Q8NGD5 310 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 KIF18AQ8NI77 898 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 TRPC4APQ8TEL6 797 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 ADIPOR1Q96A54 375 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 TM4SF18Q96CE8 201 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 NTNG2Q96CW9 530 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 TMEM237Q96Q45 408 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 HBEGFQ99075 208 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 TREX2Q9BQ50 279 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-209ENST00000474432 ENKD1Q9H0I2 346 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 TP63Q9H3D4 680 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-209ENST00000474432 ELOVL6Q9H5J4 265 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 TNFRSF10DQ9UBN6 386 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 TRPS1Q9UHF7 1281 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 SLC12A4Q9UP95 1085 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 PCDHA9Q9Y5H5 950 aa17.09■□□□□ 0.33
COL7A1-209ENST00000474432 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.09■□□□□ 0.33
COL7A1-209ENST00000474432 TACC2O95359 2948 aa17.08■□□□□ 0.33
COL7A1-209ENST00000474432 OTOGQ6ZRI0 2925 aa17.08■□□□□ 0.33
COL7A1-209ENST00000474432 ATP6AP2A0A1C7CYW4 349 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 ATP6AP2O75787 350 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 CPMP14384 443 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 COX6B1P14854 86 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 CHN1P15882 459 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 PIK3R1P27986 724 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 DUSP2Q05923 314 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 DUSP8Q13202 625 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 SLC29A2Q14542 456 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 NTRK2Q16620 822 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 PRAMEF20Q5VT98 475 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 RTL6Q6ICC9 239 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 SLC48A1Q6P1K1 146 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 PAOXQ6QHF9 649 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 IFT20Q8IY31 132 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 EID3Q8N140 333 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 CEP112Q8N8E3 955 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 OR5M9Q8NGP3 310 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 SELENOMQ8WWX9 145 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 TP53INP1Q96A56 240 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 MTBPQ96DY7 904 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 SMC6Q96SB8 1091 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 ZNF703Q9H7S9 590 aaPredicted RBP17.08■□□□□ 0.32
COL7A1-209ENST00000474432 BRF2Q9HAW0 419 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 AHSPQ9NZD4 102 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 RNF6Q9Y252 685 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 FAM215AQ9Y5M1 114 aa17.08■□□□□ 0.32
COL7A1-209ENST00000474432 C2orf92A0A1B0GVN3 265 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 OR14I1A6ND48 311 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 MANBAO00462 879 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 AQP7O14520 342 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 LRATO95237 230 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 MAPK12P53778 367 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 NUP107P57740 925 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 TEX35Q5T0J7 233 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 LGSNQ5TDP6 509 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 PAGE2Q7Z2X7 111 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 GALNT12Q8IXK2 581 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 DND1Q8IYX4 353 aaKnown RBP17.07■□□□□ 0.32
COL7A1-209ENST00000474432 LRRC25Q8N386 305 aaPredicted RBP17.07■□□□□ 0.32
COL7A1-209ENST00000474432 SIMC1Q8NDZ2 872 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 OR10A5Q9H207 317 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 RUBCNLQ9H714 662 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 ZFP64Q9NPA5 681 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 RYDENQ9NUL5 291 aaKnown RBP17.07■□□□□ 0.32
COL7A1-209ENST00000474432 CNIH4Q9P003 139 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 SPRR3Q9UBC9 169 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 ZNF639Q9UID6 485 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 EMCNQ9ULC0 261 aa17.07■□□□□ 0.32
COL7A1-209ENST00000474432 DTX4Q9Y2E6 619 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms