RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SH2D4BQ5SQS7 431 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 GALNT18Q6P9A2 607 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 GFRALQ6UXV0 394 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 C9orf40Q8IXQ3 194 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 SAMD14Q8IZD0 417 aaPredicted RBP13.18□□□□□ -0.3
VAMP4-203ENST00000474047 LRRC25Q8N386 305 aaPredicted RBP13.18□□□□□ -0.3
VAMP4-203ENST00000474047 NUBPLQ8TB37 319 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 EXOSC8Q96B26 276 aaKnown RBP13.18□□□□□ -0.3
VAMP4-203ENST00000474047 SSU72Q9NP77 194 aaKnown RBP13.18□□□□□ -0.3
VAMP4-203ENST00000474047 MIEF1Q9NQG6 463 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 HEY2Q9UBP5 337 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 BCAP29Q9UHQ4 241 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 CES1P1Q9UKY3 287 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 ENTPD4Q9Y227 616 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 TRAF6Q9Y4K3 522 aa13.18□□□□□ -0.3
VAMP4-203ENST00000474047 POLR3HQ9Y535 204 aaPredicted RBP13.18□□□□□ -0.3
VAMP4-203ENST00000474047 SVILO95425 2214 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 C2orf92A0A1B0GVN3 265 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 TM9SF1O15321 606 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 PEX1O43933 1283 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 SERPINB5P36952 375 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 SLC37A1P57057 533 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 MPEG1Q2M385 716 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 FAM180BQ6P0A1 224 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 RTL4Q6ZR62 310 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 VWA5B2Q8N398 1253 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 FAM76AQ8TAV0 307 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 PGM2Q96G03 612 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 BBS4Q96RK4 519 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 PAIP2Q9BPZ3 127 aaKnown RBP13.17□□□□□ -0.3
VAMP4-203ENST00000474047 SLX1AQ9BQ83 275 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 OR10A5Q9H207 317 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 LRTM1Q9HBL6 345 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 C1orf109Q9NX04 203 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 SIRT5Q9NXA8 310 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 OSGIN2Q9Y236 505 aa13.17□□□□□ -0.3
VAMP4-203ENST00000474047 ASH1LQ9NR48 2969 aaKnown RBP13.17□□□□□ -0.3
VAMP4-203ENST00000474047 UNC5CO95185 931 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 ZWINTO95229 277 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 HSPA4LO95757 839 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 FGF4P08620 206 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 SERPINB4P48594 390 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 PIGGQ5H8A4 983 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 KANK2Q63ZY3 851 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 NOXRED1Q6NXP6 359 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 MDGA2Q7Z553 956 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 SULF2Q8IWU5 870 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 TAGAPQ8N103 731 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 SLC15A4Q8N697 577 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 PSD4Q8NDX1 1056 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 ADCY4Q8NFM4 1077 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 OR7G1Q8NGA0 311 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 TWIST2Q8WVJ9 160 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 METTL2AQ96IZ6 378 aaKnown RBP13.16□□□□□ -0.3
VAMP4-203ENST00000474047 PKNOX2Q96KN3 472 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 WWTR1Q9GZV5 400 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 WBP11Q9Y2W2 641 aaKnown RBP13.16□□□□□ -0.3
VAMP4-203ENST00000474047 PTGDR2Q9Y5Y4 395 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 ACTL7BQ9Y614 415 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 MAST4O15021 2626 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 NPIPA5E9PKD4 350 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 BIRC5O15392 142 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 P04436 131 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 ATP1B1P05026 303 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 CT62P0C5K7 136 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 ZNF24P17028 368 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 MST1P26927 711 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 MEOX1P50221 254 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 NR0B1P51843 470 aaKnown RBP13.16□□□□□ -0.3
VAMP4-203ENST00000474047 GPR85P60893 370 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 RBPJQ06330 500 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 FUT7Q11130 342 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 GALNTL6Q49A17 601 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 ZNF324BQ6AW86 544 aaPredicted RBP13.16□□□□□ -0.3
VAMP4-203ENST00000474047 ZNF227Q86WZ6 799 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
VAMP4-203ENST00000474047 POGLUT1Q8NBL1 392 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 FAM13CQ8NE31 585 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 CNRIP1Q96F85 164 aaPredicted RBP13.16□□□□□ -0.3
VAMP4-203ENST00000474047 SGCZQ96LD1 299 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 TSPAN10Q9H1Z9 355 aaPredicted RBP13.16□□□□□ -0.3
VAMP4-203ENST00000474047 SLC35C2Q9NQQ7 365 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 EHD3Q9NZN3 535 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 NPIPA1Q9UND3 350 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 CFL2Q9Y281 166 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 DNAJC15Q9Y5T4 150 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 TENM4Q6N022 2769 aa13.16□□□□□ -0.3
VAMP4-203ENST00000474047 ASPDHA6ND91 283 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 CAPN14A8MX76 684 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 TMEM233B4DJY2 109 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 MPIP34949 423 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 PTGER1P34995 402 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 ETV4P43268 484 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 NRG3P56975 720 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 KCNK10P57789 538 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 PLGLB1Q02325 96 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 MAP4K2Q12851 820 aa13.15□□□□□ -0.3
VAMP4-203ENST00000474047 CHI3L2Q15782 390 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms