RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 LRIT1Q9P2V4 623 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 BAG5Q9UL15 447 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 PADI2Q9Y2J8 665 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 SH3GLB1Q9Y371 365 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 SAMHD1Q9Y3Z3 626 aaKnown RBP16.93■□□□□ 0.3
VARS2-206ENST00000473916 TESMINQ9Y4I5 508 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 RHPN2P1A8MT19 583 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 CYR61O00622 381 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 FGF17O60258 216 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 TDGF1P13385 188 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 MYF6P23409 242 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 CLCN2P51788 898 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 KCNAB1Q14722 419 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 IFI44LQ53G44 452 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 COMTD1Q86VU5 262 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 LRRC25Q8N386 305 aaPredicted RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 GPR32P1Q8NGA4 272 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 OR4K14Q8NGD5 310 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 SFXN5Q8TD22 340 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 TREX2Q9BQ50 279 aaPredicted RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 WFDC6Q9BQY6 131 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 LYRM4Q9HD34 91 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 ZNF451Q9Y4E5 1061 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 A0A0A6YYC8 382 aaPredicted RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 I3L1I5 382 aaPredicted RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 FHP07954 510 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 CD247P20963 164 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 ZNF10P21506 573 aaPredicted RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 RRM2P31350 389 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 POLR2IP36954 125 aaKnown RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 CTSKP43235 329 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 GABRA4P48169 554 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 FOXD4Q12950 439 aaPredicted RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 PRTGQ2VWP7 1150 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 LYSMD4Q5XG99 296 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 GALNT5Q7Z7M9 940 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 CYP4Z1Q86W10 505 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 NUP43Q8NFH3 380 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 GIMAP5Q96F15 307 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 RBM4BQ9BQ04 359 aaKnown RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 RBM4Q9BWF3 364 aaKnown RBP16.92■□□□□ 0.3
VARS2-206ENST00000473916 ZSCAN32Q9NX65 697 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 USE1Q9NZ43 259 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 TMEM9Q9P0T7 183 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 PSME2Q9UL46 239 aa16.92■□□□□ 0.3
VARS2-206ENST00000473916 EMC8O43402 210 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 HPRP00739 348 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 ALBP02768 609 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 CHRM4P08173 479 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 HOXB6P17509 224 aaKnown RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 TLX1P31314 330 aaPredicted RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 KHKP50053 298 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 CFHR1Q03591 330 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 PUM1Q14671 1186 aaKnown RBP eCLIP16.91■□□□□ 0.3
VARS2-206ENST00000473916 USP51Q70EK9 711 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 PATL1Q86TB9 770 aaKnown RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 HIPK1Q86Z02 1210 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 Q8N9G6 341 aaPredicted RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 THUMPD1Q9NXG2 353 aaKnown RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 P2RX2Q9UBL9 471 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 MFN2O95140 757 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 TNFAIP8O95379 198 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 NR2F1P10589 423 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 CPMP14384 443 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 DNAJA1P31689 397 aaKnown RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 MLLT3P42568 568 aaPredicted RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 DAPP51397 102 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 AMZ1Q400G9 498 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 MANEAQ5SRI9 462 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 RNF220Q5VTB9 566 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 GATAD2AQ86YP4 633 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 MAML2Q8IZL2 1156 aaPredicted RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 METTL27Q8N6F8 245 aaPredicted RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 ARL10Q8N8L6 244 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 OR56A1Q8NGH5 318 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 OR52J3Q8NH60 311 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 APOBEC4Q8WW27 367 aaKnown RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 LZICQ8WZA0 190 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 TCTN2Q96GX1 697 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 MUS81Q96NY9 551 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 COL21A1Q96P44 957 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 OR7D2Q96RA2 312 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 ZNF696Q9H7X3 374 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 REEP1Q9H902 201 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 SOHLH2Q9NX45 425 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 PDP1Q9P0J1 537 aaPredicted RBP16.91■□□□□ 0.3
VARS2-206ENST00000473916 HCN3Q9P1Z3 774 aa16.91■□□□□ 0.3
VARS2-206ENST00000473916 ATP6V1B1P15313 513 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 FPR1P21462 350 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 MAT1AQ00266 395 aaKnown RBP16.9■□□□□ 0.3
VARS2-206ENST00000473916 KCNAB2Q13303 367 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 SIM2Q14190 667 aaPredicted RBP16.9■□□□□ 0.3
VARS2-206ENST00000473916 ELOAQ14241 798 aaKnown RBP16.9■□□□□ 0.3
VARS2-206ENST00000473916 SYT16Q17RD7 645 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 TRMT12Q53H54 448 aaKnown RBP16.9■□□□□ 0.3
VARS2-206ENST00000473916 FOXB2Q5VYV0 432 aa16.9■□□□□ 0.3
VARS2-206ENST00000473916 PMS2CLQ68D20 193 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms