RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 RAX2Q96IS3 184 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 C3orf30Q96M34 536 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 LRFN5Q96NI6 719 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CYP2S1Q96SQ9 504 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 VAT1Q99536 393 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 RAD9AQ99638 391 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF559Q9BR84 538 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 INPP5KQ9BT40 448 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 OPN3Q9H1Y3 402 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TMPRSS5Q9H3S3 457 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MEAF6Q9HAF1 191 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 NMRAL1Q9HBL8 299 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MYOZ1Q9NP98 299 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 PDGFCQ9NRA1 345 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 IL17RBQ9NRM6 502 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 AGPAT3Q9NRZ7 376 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 KLHL11Q9NVR0 708 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC39A10Q9ULF5 831 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CA5BQ9Y2D0 317 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 PLEKHA6Q9Y2H5 1048 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF879B4DU55 563 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 H0YCG3 227 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 FXYD1O00168 92 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF197O14709 1029 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TOX3O15405 576 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 LYRM1O43325 122 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 UBXN7O94888 489 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MPIG6BO95866 241 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 LGI1O95970 557 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 HEXAP06865 529 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TSPAN19P0C672 248 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ARP10275 920 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 OSMP13725 252 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ARF4P18085 180 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 DNASE1P24855 282 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MC4RP32245 332 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CCR7P32248 378 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CRATP43155 626 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MAGEA2P43356 314 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 PIK3CGP48736 1102 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 RGS6P49758 472 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 GNG10P50151 68 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 RPS7P62081 194 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 SNRPEP62304 92 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 PRR5P85299 388 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MC2RQ01718 297 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 FOXO1Q12778 655 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 SGCGQ13326 291 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 NFYCQ13952 458 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TMEM95Q3KNT9 176 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 PYCR3Q53H96 274 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 DNLZQ5SXM8 178 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 HECTD3Q5T447 861 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 LIPJQ5W064 366 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 C19orf48Q6RUI8 117 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 NAXDQ8IW45 347 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 TP53INP2Q8IXH6 220 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 PDZD9Q8IXQ8 264 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM126BQ8IXS8 530 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ADGRF3Q8IZF5 1079 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 POMGNT2Q8NAT1 580 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ABHD4Q8TB40 342 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 SPPL2BQ8TCT7 592 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CXorf58Q96LI9 332 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CCNL2Q96S94 520 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 SEPHS2Q99611 448 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MAP3K3Q99759 626 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 CHCHD6Q9BRQ6 235 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 KATNB1Q9BVA0 655 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 B3GNT5Q9BYG0 378 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 MRPL37Q9BZE1 423 aaKnown RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 SMURF2Q9HAU4 748 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 ING1Q9UK53 422 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 PADI2Q9Y2J8 665 aa4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 POLR3HQ9Y535 204 aaPredicted RBP4.88□□□□□ -1.63
TMEM39A-206ENST00000473684 FABP12A6NFH5 140 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 NUDT19A8MXV4 375 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 TMEM189-UBE2V1I3L0A0 370 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 L7N2F9 121 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 NOBOXO60393 691 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 CIDEAO60543 219 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 RECQL4O94761 1208 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 HCKP08631 526 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 HIST1H2AGP0C0S8 130 aaPredicted RBP4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 ADRB3P13945 408 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 MTHFD2P13995 350 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 HIST1H2ADP20671 130 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 CYP2B6P20813 491 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 KIR3DL2P43630 455 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 HSPA7P48741 367 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 CLCN3P51790 818 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 VAMP7P51809 220 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 RAB2AP61019 212 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC6A3Q01959 620 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 CAMK2DQ13557 499 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 SERTAD2Q14140 314 aa4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 GK2Q14410 553 aaPredicted RBP4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 PIGHQ14442 188 aaPredicted RBP4.87□□□□□ -1.63
TMEM39A-206ENST00000473684 OPCMLQ14982 345 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms