RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 LDAHQ9H6V9 325 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 ENTPD4Q9Y227 616 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 ITPR2Q14571 2701 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 PCNX1Q96RV3 2341 aa10.68□□□□□ -0.7
CPNE1-222ENST00000473373 CENPEQ02224 2701 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 POLEQ07864 2286 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 NCKAP5O14513 1909 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 ASPDHA6ND91 283 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 OR6C76A6NM76 312 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 FAM166BA8MTA8 275 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 H3BQF6 201 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 HRKO00198 91 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 PLIN3O60664 434 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 PDE9AO76083 593 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 TPOP07202 933 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 STSP08842 583 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 SERPINB3P29508 390 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 SSTR4P31391 388 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 TMED10P49755 219 aaKnown RBP10.67□□□□□ -0.7
CPNE1-222ENST00000473373 HTR6P50406 440 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 NR0B1P51843 470 aaKnown RBP10.67□□□□□ -0.7
CPNE1-222ENST00000473373 PPIAP62937 165 aaKnown RBP10.67□□□□□ -0.7
CPNE1-222ENST00000473373 KCNJ2P63252 427 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 HSF1Q00613 529 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 HMGCS1Q01581 520 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 SPRED3Q2MJR0 410 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 LIPMQ5VYY2 423 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 EMBQ6PCB8 327 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 DGAT2L6Q6ZPD8 337 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 SLC22A16Q86VW1 577 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 C9orf40Q8IXQ3 194 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 AGAP11Q8TF27 550 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 MZB1Q8WU39 189 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 UCN3Q969E3 161 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 APOPT1Q96IL0 206 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 SGCZQ96LD1 299 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 FAM173AQ9BQD7 235 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 DEFB127Q9H1M4 99 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 CENPHQ9H3R5 247 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 GSTO2Q9H4Y5 243 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 TRIM45Q9H8W5 580 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-222ENST00000473373 MIEF1Q9NQG6 463 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 RRAGDQ9NQL2 400 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-222ENST00000473373 MCM8Q9UJA3 840 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 TINAGQ9UJW2 476 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 UTS2RQ9UKP6 389 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 CFL2Q9Y281 166 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 PCDHA9Q9Y5H5 950 aa10.67□□□□□ -0.7
CPNE1-222ENST00000473373 TP53I11O14683 189 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 SPAG7O75391 227 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 IL3P08700 152 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 ANXA4P09525 319 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 CHN1P15882 459 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 CSNK2A2P19784 350 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 CNR1P21554 472 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 CA7P43166 264 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 TRA2BP62995 288 aaKnown RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 RPP38P78345 283 aaKnown RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 GALNT1Q10472 559 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 HEPACAMQ14CZ8 416 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 C3AR1Q16581 482 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 MPEG1Q2M385 716 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 PRAMEF20Q5VT98 475 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 FAM219BQ5XKK7 198 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 SLC22A10Q63ZE4 541 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 FAM180BQ6P0A1 224 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 SLC48A1Q6P1K1 146 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 FRMD7Q6ZUT3 714 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF227Q86WZ6 799 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 SPPL2CQ8IUH8 684 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 DND1Q8IYX4 353 aaKnown RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 ARMC10Q8N2F6 343 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 LRRC25Q8N386 305 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 VWA5B2Q8N398 1253 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 GOLM1Q8NBJ4 401 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 OR2M7Q8NG81 312 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 PPP1R14CQ8TAE6 165 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 EXOSC8Q96B26 276 aaKnown RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 FAM111AQ96PZ2 611 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 BBS4Q96RK4 519 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 ACPTQ9BZG2 426 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 WWTR1Q9GZV5 400 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 OR10A5Q9H207 317 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 C12orf65Q9H3J6 166 aaKnown RBP10.66□□□□□ -0.7
CPNE1-222ENST00000473373 CXorf21Q9HAI6 301 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF225Q9UK10 706 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 EMCNQ9ULC0 261 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 DLGAP4Q9Y2H0 992 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 ARHGAP21Q5T5U3 1957 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 CACNA1DQ01668 2161 aa10.66□□□□□ -0.7
CPNE1-222ENST00000473373 PHF3Q92576 2039 aaKnown RBP10.65□□□□□ -0.7
CPNE1-222ENST00000473373 CELSR2Q9HCU4 2923 aa10.65□□□□□ -0.7
CPNE1-222ENST00000473373 CREBBPQ92793 2442 aa10.65□□□□□ -0.7
CPNE1-222ENST00000473373 TMEM200CA6NKL6 621 aa10.65□□□□□ -0.7
CPNE1-222ENST00000473373 ESPNB1AK53 854 aa10.65□□□□□ -0.7
CPNE1-222ENST00000473373 PRSS44E7EML9 344 aa10.65□□□□□ -0.7
CPNE1-222ENST00000473373 G3V2L1 256 aa10.65□□□□□ -0.7
CPNE1-222ENST00000473373 ZNHIT1O43257 154 aa10.65□□□□□ -0.7
CPNE1-222ENST00000473373 ZNF500O60304 480 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms