RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CT62P0C5K7 136 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 NT5EP21589 574 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 COL8A1P27658 744 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 SSTR4P31391 388 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 DEKP35659 375 aaKnown RBP20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 NAGLUP54802 743 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 DNAJB13P59910 316 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 PLGLB1Q02325 96 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 FUT7Q11130 342 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 ZNF791Q3KP31 576 aaPredicted RBP20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 SPIN4Q56A73 249 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 CMPK2Q5EBM0 449 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 LYPD8Q6UX82 237 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 DND1Q8IYX4 353 aaKnown RBP20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 MMP21Q8N119 569 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 SPACA9Q96E40 222 aaPredicted RBP20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 PSME2Q9UL46 239 aa20.82■□□□□ 0.92
PTP4A1-203ENST00000473334 SERTM1A2A2V5 107 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 UBFD1O14562 309 aaKnown RBP20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 PCDH7O60245 1069 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 CDC40O60508 579 aaKnown RBP eCLIP20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 ERAL1O75616 437 aaKnown RBP20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 NUDT17P0C025 328 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 CCL3P10147 92 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 ESRRAP11474 423 aaPredicted RBP20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 HMGCS1Q01581 520 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 SLC18A2Q05940 514 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 ACSM2AQ08AH3 577 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 CFAP157Q5JU67 520 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 ACSM2BQ68CK6 577 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 RPTNQ6XPR3 784 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 RGS9BPQ6ZS82 235 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 FRMD7Q6ZUT3 714 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 FAM47EQ6ZV65 393 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 FGD2Q7Z6J4 655 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 C4orf33Q8N1A6 199 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 RIBC1Q8N443 379 aaPredicted RBP20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 OR52N2Q8NGI0 321 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 OR2W6PQ8NHA6 318 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 ITLN2Q8WWU7 325 aaPredicted RBP20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 MID2Q9UJV3 735 aa20.81■□□□□ 0.92
PTP4A1-203ENST00000473334 C2orf92A0A1B0GVN3 265 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 TLDC2A0PJX2 215 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 ZNHIT1O43257 154 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 ATP1B1P05026 303 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 FBXO45P0C2W1 286 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 CPA3P15088 417 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 CSNK2A2P19784 350 aaPredicted RBP20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 ALDH9A1P49189 494 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 PPIAP62937 165 aaKnown RBP20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 RAE1P78406 368 aaKnown RBP20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 SLC22A10Q63ZE4 541 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 SLC22A16Q86VW1 577 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 TAGAPQ8N103 731 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 ZNF615Q8N8J6 731 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 ZNF441Q8N8Z8 693 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 OR7G1Q8NGA0 311 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 KLHL29Q96CT2 875 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 APIPQ96GX9 242 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 TTTY12Q9BZ98 90 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 OR10A5Q9H207 317 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 C12orf65Q9H3J6 166 aaKnown RBP20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 SH2D2AQ9NP31 389 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 PLSCR2Q9NRY7 297 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 OXSMQ9NWU1 459 aa20.8■□□□□ 0.92
PTP4A1-203ENST00000473334 UNC79Q9P2D8 2635 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 NAV2Q8IVL1 2488 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 A0A1B0GTH9 108 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 FAM166BA8MTA8 275 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 PRRG2O14669 202 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 GLSO94925 669 aaPredicted RBP20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 SLU7O95391 586 aaKnown RBP20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 SERPINB3P29508 390 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 PTGS2P35354 604 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 FEN1P39748 380 aaKnown RBP20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 DNASE1L1P49184 302 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 FOXA1P55317 472 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 PRICKLE4Q2TBC4 344 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 LIPMQ5VYY2 423 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 HLA-DQA1Q5Y7H0 255 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 SCIMPQ6UWF3 145 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 VWA5B2Q8N398 1253 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 ZNF808Q8N4W9 903 aaPredicted RBP20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 PAQR8Q8TEZ7 354 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 TP53INP1Q96A56 240 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 BRINP2Q9C0B6 783 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 ZDHHC11Q9H8X9 412 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 IL1RL2Q9HB29 575 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 MKS1Q9NXB0 559 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 DLGAP4Q9Y2H0 992 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 MEMO1Q9Y316 297 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 ZNF780BQ9Y6R6 833 aa20.79■□□□□ 0.92
PTP4A1-203ENST00000473334 NCOA6Q14686 2063 aaPredicted RBP20.78■□□□□ 0.92
PTP4A1-203ENST00000473334 GNG14A0A1W2PPG7 69 aa20.78■□□□□ 0.92
PTP4A1-203ENST00000473334 ZNF500O60304 480 aaPredicted RBP20.78■□□□□ 0.92
PTP4A1-203ENST00000473334 IL3P08700 152 aa20.78■□□□□ 0.92
PTP4A1-203ENST00000473334 TIA1P31483 386 aaKnown RBP eCLIP20.78■□□□□ 0.928e-8■■■□□ 17.4
PTP4A1-203ENST00000473334 DCTP40126 519 aa20.78■□□□□ 0.92
PTP4A1-203ENST00000473334 NR0B1P51843 470 aaKnown RBP20.78■□□□□ 0.92
PTP4A1-203ENST00000473334 MAP4K2Q12851 820 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms