RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 DNALI1O14645 258 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 ST8SIA5O15466 376 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 TRAPPC6AO75865 159 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 TP53P04637 393 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 HIST1H1TP22492 207 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 CPN2P22792 545 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 CTSSP25774 331 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 GDF1P27539 372 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 GSTM2P28161 218 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 CDC25BP30305 580 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 OPRM1P35372 400 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 CASP2P42575 452 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 RPL21P46778 160 aaKnown RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 CPA2P48052 419 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 HNRNPH2P55795 449 aaKnown RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 HERVK_113P63132 956 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 ERVK-8P63133 956 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 DMTNQ08495 405 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 ZNF267Q14586 743 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 EBPQ15125 230 aaKnown RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 NHSL2Q5HYW2 709 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 WIPI1Q5MNZ9 446 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 C22orf34Q6ZV56 151 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 NKAPQ8N5F7 415 aaKnown RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 SLC15A4Q8N697 577 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 TRIM58Q8NG06 486 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 SLC22A8Q8TCC7 542 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 KCNC2Q96PR1 638 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 TBCDQ9BTW9 1192 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 DOHHQ9BU89 302 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 RBM24Q9BX46 236 aaKnown RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 ERVK-6Q9BXR3 956 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 ZNF717Q9BY31 904 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 ANGPTL4Q9BY76 406 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 PITHD1Q9GZP4 211 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 WWTR1Q9GZV5 400 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 OR51B5Q9H339 312 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 RPF2Q9H7B2 306 aaKnown RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 CAB39LQ9H9S4 337 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 UBTD1Q9HAC8 227 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 DNAJC11Q9NVH1 559 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 MOCS1Q9NZB8 636 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 GPRC5BQ9NZH0 403 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 CTNNAL1Q9UBT7 734 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 COPS7AQ9UBW8 275 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 NDRG3Q9UGV2 375 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 PTBP2Q9UKA9 531 aaKnown RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 CORO1CQ9ULV4 474 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 BOKQ9UMX3 212 aaPredicted RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 CAMK2AQ9UQM7 478 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 ERVK-19Q9WJR5 959 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 MTO1Q9Y2Z2 717 aaKnown RBP8.5□□□□□ -1.05
VCL-204ENST00000472585 NPFFR2Q9Y5X5 522 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 IKBKGQ9Y6K9 419 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 ABCA1O95477 2261 aa8.5□□□□□ -1.05
VCL-204ENST00000472585 A0A088AWK7 358 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 PABPN1LA6NDY0 278 aaKnown RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 GLOD5A6NK44 160 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 DEFB108AA8MXU0 73 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 ERN1O75460 977 aaKnown RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 IL18BPO95998 194 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 CT62P0C5K7 136 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 ZNF10P21506 573 aaPredicted RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 SERPINB3P29508 390 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 SSTR4P31391 388 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 PTGDSP41222 190 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 CASP3P42574 277 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 MSH2P43246 934 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 CHIT1Q13231 466 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 SLAMF1Q13291 335 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 FASTKD3Q14CZ7 662 aaKnown RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 ACKR1Q16570 336 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 OR4C11Q6IEV9 310 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 SYDE1Q6ZW31 735 aaPredicted RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 ADGRE4PQ86SQ3 457 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 LUZP2Q86TE4 346 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 YRDCQ86U90 279 aaKnown RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 ANKMY2Q8IV38 441 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 LAS2Q8IYD9 372 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 PM20D2Q8IYS1 436 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 OR7G3Q8NG95 312 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 PPP1R14CQ8TAE6 165 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 SPPL2AQ8TCT8 520 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 DIO2Q92813 273 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 PTCD3Q96EY7 689 aaKnown RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 RBM18Q96H35 190 aaKnown RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 RILPQ96NA2 401 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 DGAT2Q96PD7 388 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 GAL3ST4Q96RP7 486 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 TUBA1CQ9BQE3 449 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 PIGQQ9BRB3 760 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 COPS7BQ9H9Q2 264 aaPredicted RBP8.49□□□□□ -1.05
VCL-204ENST00000472585 CALHM2Q9HA72 323 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 GALNT8Q9NY28 637 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 C15orf41Q9Y2V0 281 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 ASB4Q9Y574 426 aa8.49□□□□□ -1.05
VCL-204ENST00000472585 CUBNO60494 3623 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 A0A1W2PR48 441 aa8.48□□□□□ -1.05
VCL-204ENST00000472585 CXorf49A8MYA2 514 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms