RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ERVK-8P63133 956 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 OLR1P78380 273 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 EMX2Q04743 252 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 FOXM1Q08050 763 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 RGS1Q08116 209 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 TARDBPQ13148 414 aaKnown RBP eCLIP4.46□□□□□ -1.7
SF3B1-208ENST00000470268 PTGR1Q14914 329 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 DEFB134Q4QY38 66 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 ATP6AP1LQ52LC2 224 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 IL23RQ5VWK5 629 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 ACSM2BQ68CK6 577 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 PWWP2BQ6NUJ5 590 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 NOXRED1Q6NXP6 359 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 CYB5D1Q6P9G0 228 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 TMEM151BQ8IW70 566 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 MMP21Q8N119 569 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 TBC1D19Q8N5T2 526 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 METTL27Q8N6F8 245 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-208ENST00000470268 CAMKVQ8NCB2 501 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 OR9I1Q8NGQ6 314 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 OR9A4Q8NGU2 314 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 CLHC1Q8NHS4 586 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 STON2Q8WXE9 905 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 PMM1Q92871 262 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 UCN3Q969E3 161 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 CLPTM1LQ96KA5 538 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 PPP3R2Q96LZ3 170 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 CATSPER2Q96P56 530 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 QRFPRQ96P65 431 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 SERPINI1Q99574 410 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 CCDC28BQ9BUN5 200 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 DDX31Q9H8H2 851 aaKnown RBP4.46□□□□□ -1.7
SF3B1-208ENST00000470268 ACTR5Q9H9F9 607 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-208ENST00000470268 AKIRIN1Q9H9L7 192 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-208ENST00000470268 SIRT5Q9NXA8 310 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 DHCR7Q9UBM7 475 aaKnown RBP4.46□□□□□ -1.7
SF3B1-208ENST00000470268 CLCA2Q9UQC9 943 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 NAALAD2Q9Y3Q0 740 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 LOXL2Q9Y4K0 774 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 GPR45Q9Y5Y3 372 aa4.46□□□□□ -1.7
SF3B1-208ENST00000470268 ADAMTS20P59510 1910 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 UNC13CQ8NB66 2214 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PRAMEF25A6NGN4 478 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 CAPN14A8MX76 684 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SGK494L7N484 410 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 UBDO15205 165 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PCDH7O60245 1069 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 GALR3O60755 368 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 VPS4BO75351 444 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 DCTN3O75935 186 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SCELO95171 688 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FGF5P12034 268 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 IL12AP29459 219 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TIA1P31483 386 aaKnown RBP eCLIP4.45□□□□□ -1.71e-23■■■■■ 44.3
SF3B1-208ENST00000470268 SSR2P43308 183 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ITGA1P56199 1179 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 NME5P56597 212 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FOXL2P58012 376 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 STXBP1P61764 594 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 BTN3A2P78410 334 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PHEXP78562 749 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 MC2RQ01718 297 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 MC1RQ01726 317 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ACY1Q03154 408 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 DBPQ10586 325 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 RUNX2Q13950 521 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 GRM7Q14831 915 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SYT16Q17RD7 645 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TMEM35AQ53FP2 167 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SPIN4Q56A73 249 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TCTE1Q5JU00 501 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 MANEAQ5SRI9 462 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TMTC4Q5T4D3 741 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 OR4C11Q6IEV9 310 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TRIM40Q6P9F5 258 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ETV3LQ6ZN32 361 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 FUNDC1Q8IVP5 155 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 LIX1Q8N485 282 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 KRTCAP2Q8N6L1 136 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ACOT4Q8N9L9 421 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PROKR1Q8TCW9 393 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ADAMTS14Q8WXS8 1223 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 N4BP2L2Q92802 583 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 RGMAQ96B86 450 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TSSK3Q96PN8 268 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 KCNC2Q96PR1 638 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 CMKLR1Q99788 373 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 CCDC106Q9BWC9 280 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 CADM1Q9BY67 442 aaKnown RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SAR1AQ9NR31 198 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SDR39U1Q9NRG7 319 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 SLC22A11Q9NSA0 550 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 AIG1Q9NVV5 245 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 TEX10Q9NXF1 929 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-208ENST00000470268 KCMF1Q9P0J7 381 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 PACSIN3Q9UKS6 424 aa4.45□□□□□ -1.7
SF3B1-208ENST00000470268 ATG4BQ9Y4P1 393 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms