RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NR4A1P22736 598 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 POU1F1P28069 291 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 CD40LGP29965 261 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 PKLRP30613 574 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 BSGP35613 385 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 AHRP35869 848 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 MASP1P48740 699 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 NCBP2P52298 156 aaKnown RBP eCLIP7.57□□□□□ -1.26e-34■■■■■ 154.9
SMC4-212ENST00000470240 VBP1P61758 197 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 STXBP1P61764 594 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 PRDX1Q06830 199 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 IRF4Q15306 451 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 INAQ16352 499 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 SMN1Q16637 294 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 DUSP6Q16828 381 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 WSCD2Q2TBF2 565 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 ZNF404Q494X3 552 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 ATAD3BQ5T9A4 648 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 PRAMEF8Q5VWM4 474 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 PRAMEF7Q5VXH5 474 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 DEF8Q6ZN54 512 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 VN1R5Q7Z5H4 357 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 C11orf96Q7Z7L8 435 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 IGFN1Q86VF2 1251 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 SAMD14Q8IZD0 417 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 HDDC3Q8N4P3 179 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 C2orf73Q8N5S3 287 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 HORMAD2Q8N7B1 307 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 PLA2G15Q8NCC3 412 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 ZNF740Q8NDX6 193 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 OR9Q2Q8NGE9 314 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 OR6Q1Q8NGQ2 317 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 PSMA8Q8TAA3 256 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 SUN3Q8TAQ9 357 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 DYNC2LI1Q8TCX1 351 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 SNRNP27Q8WVK2 155 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 APH1BQ8WW43 257 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 TM4SF18Q96CE8 201 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 RSPRY1Q96DX4 576 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 CAMK1GQ96NX5 476 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 PRAP1Q96NZ9 151 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 LRRC3BQ96PB8 259 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 FNDC11Q9BVV2 318 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 BTBD2Q9BX70 525 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 ROGDIQ9GZN7 287 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 DCSTAMPQ9H295 470 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 SPNS1Q9H2V7 528 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 DDX31Q9H8H2 851 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 NMNAT1Q9HAN9 279 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 KRCC1Q9NPI7 259 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 AKIP1Q9NQ31 210 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 ZCCHC3Q9NUD5 404 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 TMEM184CQ9NVA4 438 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 GPATCH2Q9NW75 528 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 LYARQ9NX58 379 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 CHCHD3Q9NX63 227 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 TAS2R7Q9NYW3 318 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 CRNNQ9UBG3 495 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 MOSPD1Q9UJG1 213 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 KCND3Q9UK17 655 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 PNMA8BQ9ULN7 279 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMC4-212ENST00000470240 CFL2Q9Y281 166 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 KLHL20Q9Y2M5 609 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 RPL36Q9Y3U8 105 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 NUP214P35658 2090 aaPredicted RBP7.56□□□□□ -1.2
SMC4-212ENST00000470240 FEZF1A0PJY2 475 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 ISPDA4D126 451 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 ZAR1LA6NP61 321 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 ANHXE9PGG2 379 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 E9PQ18 207 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 TMX2-CTNND1H3BSU7 103 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 TAF4O00268 1085 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 NME6O75414 186 aaPredicted RBP7.56□□□□□ -1.2
SMC4-212ENST00000470240 GCM2O75603 506 aaPredicted RBP7.56□□□□□ -1.2
SMC4-212ENST00000470240 SULT1C4O75897 302 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 MFN2O95140 757 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 MED26O95402 600 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 AGR2O95994 175 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 VIPP01282 170 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 DNTTP04053 509 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 LCKP06239 509 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 HSMCR30P0CW71 290 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 ADORA3P0DMS8 318 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 POU2F1P14859 743 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 CSNK2A2P19784 350 aaPredicted RBP7.56□□□□□ -1.2
SMC4-212ENST00000470240 TNFRSF1BP20333 461 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 CBLP22681 906 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 ALDH4A1P30038 563 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 GJA4P35212 333 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 OPRD1P41143 372 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 FRKP42685 505 aaPredicted RBP7.56□□□□□ -1.2
SMC4-212ENST00000470240 LIMS1P48059 325 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 BCAP31P51572 246 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 CRYBA2P53672 197 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 DEFA1P59665 94 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 DEFA3P59666 94 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 NCS1P62166 190 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 HTRA3P83110 453 aa7.56□□□□□ -1.2
SMC4-212ENST00000470240 RGS1Q08116 209 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms