RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MAN2C1Q9NTJ4 1040 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 ERVK13-1Q9NX77 482 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 P2RX2Q9UBL9 471 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 SEC14L3Q9UDX4 400 aa12.92□□□□□ -0.34
BRCA1-209ENST00000470026 EDDM13A0A1B0GTR0 161 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 PRRT4C9JH25 899 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 PRKYO43930 277 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 LZTS3O60299 673 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 EPPINO95925 133 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 CCL5P13501 91 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 CPEP16870 476 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 HTR3AP46098 478 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 PCYT1AP49585 367 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 COPZ1P61923 177 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 NTHL1P78549 312 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 IFITM2Q01629 132 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 BNC1Q01954 994 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 MESP2Q0VG99 397 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 TARDBPQ13148 414 aaKnown RBP eCLIP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 GPR50Q13585 617 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 TCEAL5Q5H9L2 206 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 ZNF362Q5T0B9 420 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 C1orf94Q6P1W5 598 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 PODNL1Q6PEZ8 512 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 SPATC1Q76KD6 591 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 ZER1Q7Z7L7 766 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 AMZ2Q86W34 360 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 VANGL1Q8TAA9 524 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 SRRQ9GZT4 340 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 RNF208Q9H0X6 261 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 C14orf119Q9NWQ9 140 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 ZSCAN32Q9NX65 697 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 TEX10Q9NXF1 929 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 SLC23A2Q9UGH3 650 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 A0A0A6YYD5 115 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 H3BN98 237 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 RGS13O14921 159 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 NDUFS4O43181 175 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 SEC14L5O43304 696 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 SLC28A2O43868 658 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 IL1AP01583 271 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 MMP11P24347 488 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 ELAVL3Q14576 367 aaKnown RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 SYPL1Q16563 259 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 SPDYE7PQ495Y7 208 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 SYT14P1Q58G82 188 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 ENTPD8Q5MY95 495 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 METRNLQ641Q3 311 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 TMPRSS11AQ6ZMR5 421 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 MRGPREQ86SM8 312 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 TP53I13Q8NBR0 393 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 MORN4Q8NDC4 146 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 OR52I1Q8NGK6 324 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 OR6F1Q8NGZ6 308 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 EXOSC8Q96B26 276 aaKnown RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 RGMAQ96B86 450 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 ZNF486Q96H40 463 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 MSLNLQ96KJ4 702 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 POLR2J2Q9GZM3 115 aaKnown RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 OR51I1Q9H343 314 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 EXOSC4Q9NPD3 245 aaKnown RBP12.91□□□□□ -0.34
BRCA1-209ENST00000470026 C5AR2Q9P296 337 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 MUTYHQ9UIF7 546 aa12.91□□□□□ -0.34
BRCA1-209ENST00000470026 NME6O75414 186 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 RPN2P04844 631 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 OR12D1P0DN82 309 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 ACADMP11310 421 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 DRD2P14416 443 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 RFX2P48378 723 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 GIPRP48546 466 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 FOXD4Q12950 439 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 PIN1Q13526 163 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 C1DQ13901 141 aaKnown RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 LARS2Q15031 903 aaKnown RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 GLYR1Q49A26 553 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 FLYWCH1Q4VC44 716 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 C3orf38Q5JPI3 329 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 ZNF544Q6NX49 715 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 PAQR6Q6TCH4 344 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 BCDIN3DQ7Z5W3 292 aaKnown RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 CLDN22Q8N7P3 220 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 PLA2G15Q8NCC3 412 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 BBS10Q8TAM1 723 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 GPR151Q8TDV0 419 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 SLC25A46Q96AG3 418 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 SLC35G5Q96KT7 338 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 NRTNQ99748 197 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 GLIPR2Q9H4G4 154 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 FGF20Q9NP95 211 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 ISYNA1Q9NPH2 558 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 SSR3Q9UNL2 185 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 TMEM98Q9Y2Y6 226 aa12.9□□□□□ -0.34
BRCA1-209ENST00000470026 DNMT3AQ9Y6K1 912 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-209ENST00000470026 STK25O00506 426 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 RAB36O95755 333 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 TIMP1P01033 207 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 HNRNPA1P09651 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
BRCA1-209ENST00000470026 CEBPBP17676 345 aa12.89□□□□□ -0.35
BRCA1-209ENST00000470026 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms