RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MYBPC3Q14896 1274 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 NR0B2Q15466 257 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 LPAL2Q16609 132 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 CRB2Q5IJ48 1285 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 TCTE1Q5JU00 501 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 OTUD3Q5T2D3 398 aaPredicted RBP17.04■□□□□ 0.32
SMC4-211ENST00000469858 GUSBP11Q6P575 273 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 XAGE5Q8WWM1 108 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 EIF4E1BA6NMX2 242 aaKnown RBP17.04■□□□□ 0.32
SMC4-211ENST00000469858 TMEM229AB2RXF0 380 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 HSD11B2P80365 405 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 PPP1R8Q12972 351 aaKnown RBP17.04■□□□□ 0.32
SMC4-211ENST00000469858 FAM53BQ14153 422 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 TBPL2Q6SJ96 375 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 CARFQ8N187 725 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 METTL27Q8N6F8 245 aaPredicted RBP17.04■□□□□ 0.32
SMC4-211ENST00000469858 OR7G2Q8NG99 324 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 NUDT22Q9BRQ3 303 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 CAPN10Q9HC96 672 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 DDX18Q9NVP1 670 aaKnown RBP17.04■□□□□ 0.32
SMC4-211ENST00000469858 DNAAF2Q9NVR5 837 aaKnown RBP17.04■□□□□ 0.32
SMC4-211ENST00000469858 P2RX2Q9UBL9 471 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 ZNF639Q9UID6 485 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 BAG5Q9UL15 447 aa17.04■□□□□ 0.32
SMC4-211ENST00000469858 VPS13AQ96RL7 3174 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 TMEM247A6NEH6 219 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 YKT6O15498 198 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 SLC28A2O43868 658 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 DIRAS1O95057 198 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 IFNA14P01570 189 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 CNR2P34972 360 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 HOXD12P35452 270 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 ANXA11P50995 505 aaKnown RBP17.03■□□□□ 0.32
SMC4-211ENST00000469858 CLCN2P51788 898 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 MAT1AQ00266 395 aaKnown RBP17.03■□□□□ 0.32
SMC4-211ENST00000469858 TRIM61Q5EBN2 209 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 GARNL3Q5VVW2 1013 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 PATL1Q86TB9 770 aaKnown RBP17.03■□□□□ 0.32
SMC4-211ENST00000469858 SMYD1Q8NB12 490 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 SPPL2AQ8TCT8 520 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 MAGEE2Q8TD90 523 aaPredicted RBP17.03■□□□□ 0.32
SMC4-211ENST00000469858 LZICQ8WZA0 190 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 TANKQ92844 425 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 C16orf58Q96GQ5 468 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 C8orf4Q9NR00 106 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 THUMPD1Q9NXG2 353 aaKnown RBP17.03■□□□□ 0.32
SMC4-211ENST00000469858 MAGED1Q9Y5V3 778 aaPredicted RBP17.03■□□□□ 0.32
SMC4-211ENST00000469858 U3KQV3 271 aa17.03■□□□□ 0.32
SMC4-211ENST00000469858 LY6G6EA0A0G2JKS1 128 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 TMEM150CB9EJG8 249 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 G3V2T6 193 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 NME6O75414 186 aaPredicted RBP17.02■□□□□ 0.32
SMC4-211ENST00000469858 E2F6O75461 281 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 PGM3O95394 542 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 NSA2O95478 260 aaKnown RBP17.02■□□□□ 0.32
SMC4-211ENST00000469858 GPR75O95800 540 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 TNFRSF1BP20333 461 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 ELOAQ14241 798 aaKnown RBP17.02■□□□□ 0.32
SMC4-211ENST00000469858 GRM7Q14831 915 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 MAPK11Q15759 364 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 SYPL1Q16563 259 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 WDR74Q6RFH5 385 aaPredicted RBP17.02■□□□□ 0.32
SMC4-211ENST00000469858 FAM111BQ6SJ93 734 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 STK32CQ86UX6 486 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 ZDHHC13Q8IUH4 622 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 EID2Q8N6I1 236 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 CEP76Q8TAP6 659 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 SDCCAG3Q96C92 435 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 MMABQ96EY8 250 aaPredicted RBP17.02■□□□□ 0.32
SMC4-211ENST00000469858 PEX11GQ96HA9 241 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 OSBPL11Q9BXB4 747 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 U3KQA8 63 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 ADAMTS20P59510 1910 aa17.02■□□□□ 0.32
SMC4-211ENST00000469858 PRAMEF27A3QJZ7 478 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 DENRO43583 198 aaKnown RBP17.02■□□□□ 0.31
SMC4-211ENST00000469858 OR2B3O76000 313 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 ATXN8OSP0DMR3 200 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 NR2F1P10589 423 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 RNH1P13489 461 aaKnown RBP17.02■□□□□ 0.31
SMC4-211ENST00000469858 SYT16Q17RD7 645 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 CYP27C1Q4G0S4 372 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 PERM1Q5SV97 790 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 OR2T5Q6IEZ7 315 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 NIPAL1Q6NVV3 410 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 RABEPKQ7Z6M1 372 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 OR2T29Q8NH02 315 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 DOK4Q8TEW6 326 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 CNBD2Q96M20 576 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 VNN3Q9NY84 501 aa17.02■□□□□ 0.31
SMC4-211ENST00000469858 FITM1A5D6W6 292 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 BDP1A6H8Y1 2624 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 UBTFL6P0CB48 400 aaPredicted RBP17.01■□□□□ 0.31
SMC4-211ENST00000469858 SP9P0CG40 484 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 PNLIPP16233 465 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 NT5EP21589 574 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 PPP2R1BP30154 601 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 MAGEA8P43361 318 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 AVPR1BP47901 424 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 IFI44LQ53G44 452 aa17.01■□□□□ 0.31
SMC4-211ENST00000469858 PRSS42Q7Z5A4 293 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms