RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 POLQO75417 2590 aa15.02□□□□□ -0.01
COL9A3-208ENST00000469802 NPIPA2E9PIF3 369 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 NPIPA3F8WFD2 350 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 PPP6CO00743 305 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 BCKDKO14874 412 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 SUSD5O60279 629 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 OTCP00480 354 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 ENDOUP21128 410 aaKnown RBP15.01□□□□□ -0.01
COL9A3-208ENST00000469802 CHRNB4P30926 498 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 SSTR4P31391 388 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 TFF3Q07654 80 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 FUT7Q11130 342 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 IFT88Q13099 833 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 NTRK2Q16620 822 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 GXYLT1Q4G148 440 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 COMMD6Q7Z4G1 85 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 GALNT12Q8IXK2 581 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 LRRC25Q8N386 305 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-208ENST00000469802 METTL4Q8N3J2 472 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 UHMK1Q8TAS1 419 aaKnown RBP15.01□□□□□ -0.01
COL9A3-208ENST00000469802 ASB5Q8WWX0 329 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 LURAP1Q96LR2 239 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 FARSBQ9NSD9 589 aaKnown RBP15.01□□□□□ -0.01
COL9A3-208ENST00000469802 CNIH4Q9P003 139 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 CNOT11Q9UKZ1 510 aaKnown RBP15.01□□□□□ -0.01
COL9A3-208ENST00000469802 FAM215AQ9Y5M1 114 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.01□□□□□ -0.01
COL9A3-208ENST00000469802 ANKRD17O75179 2603 aaKnown RBP15.01□□□□□ -0.01
COL9A3-208ENST00000469802 AKAP9Q99996 3911 aa15.01□□□□□ -0.01
COL9A3-208ENST00000469802 EXOC1LA0A1B0GW35 172 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 HCN1O60741 890 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 KLK1P06870 262 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 SNRPAP09012 282 aaKnown RBP15□□□□□ -0.01
COL9A3-208ENST00000469802 CT62P0C5K7 136 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 RFPL3SP0C7P2 107 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 ACVR2AP27037 513 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 PIK3R1P27986 724 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 SERPINB3P29508 390 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 NUP107P57740 925 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 GALNT1Q10472 559 aaPredicted RBP15□□□□□ -0.01
COL9A3-208ENST00000469802 PRAMEF20Q5VT98 475 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 TTC19Q6DKK2 380 aaPredicted RBP15□□□□□ -0.01
COL9A3-208ENST00000469802 TIFABQ6ZNK6 161 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 PAGE2Q7Z2X7 111 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 MILR1Q7Z6M3 343 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 ZNF615Q8N8J6 731 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 C17orf47Q8NEP4 570 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 LILRB4Q8NHJ6 448 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 TRPC4APQ8TEL6 797 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 RND1Q92730 232 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 TP53INP1Q96A56 240 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 C14orf79Q96F83 325 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 ELOVL6Q9H5J4 265 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 BRF2Q9HAW0 419 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 ZFP64Q9NPA5 681 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 NPDC1Q9NQX5 325 aaPredicted RBP15□□□□□ -0.01
COL9A3-208ENST00000469802 AHSPQ9NZD4 102 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 TRPS1Q9UHF7 1281 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 CES1P1Q9UKY3 287 aa15□□□□□ -0.01
COL9A3-208ENST00000469802 BOKQ9UMX3 212 aaPredicted RBP15□□□□□ -0.01
COL9A3-208ENST00000469802 C2orf92A0A1B0GVN3 265 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 ATP6AP2A0A1C7CYW4 349 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 ANKRD33BA6NCL7 494 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 FIGNL2A6NMB9 653 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 ATP6AP2O75787 350 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 PDYNP01213 254 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 CPMP14384 443 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 SSTR2P30874 369 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 MAN2A2P49641 1150 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 MAPK12P53778 367 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 CDH13P55290 713 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 RPS6KA2Q15349 733 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 CCNYL2Q5T2Q4 361 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 FAM219BQ5XKK7 198 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 RTL6Q6ICC9 239 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 SLC48A1Q6P1K1 146 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 ACAD11Q709F0 780 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 FAM13CQ8NE31 585 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 OR4K14Q8NGD5 310 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 OR5M9Q8NGP3 310 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 ADIPOR1Q96A54 375 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 QPCTLQ9NXS2 382 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 SPRR3Q9UBC9 169 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 NFU1Q9UMS0 254 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 SLC12A4Q9UP95 1085 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 PCDHA9Q9Y5H5 950 aa14.99□□□□□ -0.01
COL9A3-208ENST00000469802 C1orf226A1L170 272 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 KIF2AO00139 706 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-208ENST00000469802 TRIM3O75382 744 aaPredicted RBP14.98□□□□□ -0.01
COL9A3-208ENST00000469802 TOXO94900 526 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 ATP1B1P05026 303 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 TSPAN8P19075 237 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 S1PR1P21453 382 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 ELAVL4P26378 380 aaKnown RBP14.98□□□□□ -0.01
COL9A3-208ENST00000469802 XKP51811 444 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 KCNJ2P63252 427 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 PMPCAQ10713 525 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 SLC10A1Q14973 349 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 SGO1Q5FBB7 561 aa14.98□□□□□ -0.01
COL9A3-208ENST00000469802 TRMT10CQ7L0Y3 403 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms