RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PAHP00439 452 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 IL6P05231 212 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SNRPB2P08579 225 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 C8orf89P0DMQ9 161 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 COX4I1P13073 169 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 EFNA1P20827 205 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 AGXTP21549 392 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SLC5A2P31639 672 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SRSF11Q05519 484 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 FOXC1Q12948 553 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DCTN2Q13561 401 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ZNF750Q32MQ0 723 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MINDY4Q4G0A6 757 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MLIPQ5VWP3 458 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SHISA6Q6ZSJ9 500 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 VASH1Q7L8A9 365 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CAMKMTQ7Z624 323 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ANKRD46Q86W74 232 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 OR4N5Q8IXE1 308 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 PRSS58Q8IYP2 241 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 RP9Q8TA86 221 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ADAMTS18Q8TE60 1221 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MR1Q95460 341 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 KLHL29Q96CT2 875 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 COQ8BQ96D53 544 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CMTM5Q96DZ9 223 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CNRIP1Q96F85 164 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 OR1F2PQ96R84 312 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DPH2Q9BQC3 489 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 AIFM2Q9BRQ8 373 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 DUSP26Q9BV47 211 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 SPRY4Q9C004 299 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 CHST8Q9H2A9 424 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MKKSQ9NPJ1 570 aaPredicted RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 LANCL2Q9NS86 450 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ARL8BQ9NVJ2 186 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 TMEM45AQ9NWC5 275 aa6.45□□□□□ -1.38
SCAF4-204ENST00000467731 MRPS33Q9Y291 106 aaKnown RBP6.45□□□□□ -1.38
SCAF4-204ENST00000467731 ACACAQ13085 2346 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 IGLV3-12A0A075B6K2 115 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 A0A1W2PP18 115 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ASPDHA6ND91 283 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 IDH3BO43837 385 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 FGF17O60258 216 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 CNOT3O75175 753 aaKnown RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 SEC24DO94855 1032 aaPredicted RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ZGLP1P0C6A0 271 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 CD53P19397 219 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 S100A3P33764 101 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 CPA2P48052 419 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 EFNA3P52797 238 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 WNT3P56703 355 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 BTG2P78543 158 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 PLIN5Q00G26 463 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ID2Q02363 134 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 FOLH1Q04609 750 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 OCA2Q04671 838 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 SLC13A2Q13183 592 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 FAM198BQ6UWH4 519 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 LAPTM4BQ86VI4 370 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ZC3H7AQ8IWR0 971 aaKnown RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ZNF595Q8IYB9 648 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 STT3BQ8TCJ2 826 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ZNF764Q96H86 408 aaPredicted RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 OR52E6Q96RD3 313 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 SLC25A23Q9BV35 468 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 BHLHE41Q9C0J9 482 aaPredicted RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 C12orf10Q9HB07 376 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 TIMMDC1Q9NPL8 285 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 SLAMF7Q9NQ25 335 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 SLC35C2Q9NQQ7 365 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 TAS2R7Q9NYW3 318 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 KLK13Q9UKR3 277 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 CACNA1AO00555 2505 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 MYOCOSA0A1B0GUC4 107 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ANKRD34BA5PLL1 514 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 CDRT15L2A8MXV6 281 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 H0YC42 278 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 TGFBR3LH3BV60 316 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 CLDN4O14493 209 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ANGPT2O15123 496 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 TBX19O60806 448 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 SCN2BO60939 215 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 ONECUT2O95948 504 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 SPINK2P20155 84 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 MAOAP21397 527 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 CALB2P22676 271 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 RBMS1P29558 406 aaKnown RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 FEN1P39748 380 aaKnown RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 TPD52P55327 224 aaPredicted RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 DUSP2Q05923 314 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 KPNB1Q14974 876 aaKnown RBP6.44□□□□□ -1.38
SCAF4-204ENST00000467731 MAPRE2Q15555 327 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 NKG7Q16617 165 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 MMEL1Q495T6 779 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 LIN52Q52LA3 116 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 CEP78Q5JTW2 689 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 PAGE3Q5JUK9 113 aa6.44□□□□□ -1.38
SCAF4-204ENST00000467731 FAM69BQ5VUD6 431 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms