RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 C1orf159Q96HA4 380 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 FBXL20Q96IG2 436 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 CHP1Q99653 195 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 PHACTR1Q9C0D0 580 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 ALG2Q9H553 416 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 FBXO6Q9NRD1 293 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-203ENST00000467533 ARL15Q9NXU5 204 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 BFARQ9NZS9 450 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 PROCRQ9UNN8 238 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 DLGAP4Q9Y2H0 992 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 RNF115Q9Y4L5 304 aa9.25□□□□□ -0.93
HDAC3-203ENST00000467533 IQANK1A0A1B0GTG1 560 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 SERINC4A6NH21 518 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 SLC22A20A6NK97 555 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 CDC7O00311 574 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 OR10H2O60403 315 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 THBS1P07996 1170 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 CD8BP10966 210 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 MGAT1P26572 445 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 CASP3P42574 277 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 KIR2DL2P43627 348 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-203ENST00000467533 STT3AP46977 705 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 RGS4P49798 205 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 LHX2P50458 406 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 HERVK_113P63132 956 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 ERVK-8P63133 956 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 PLIN5Q00G26 463 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 EBPQ15125 230 aaKnown RBP9.24□□□□□ -0.93
HDAC3-203ENST00000467533 NRF1Q16656 503 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 ADAM5Q6NVV9 412 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 ZNF549Q6P9A3 640 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 NXPE4Q6UWF7 544 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 C3orf56Q8N813 242 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 SLC35B2Q8TB61 432 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 DOK4Q8TEW6 326 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 CTHRC1Q96CG8 243 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 DNAJC7Q99615 494 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 NTMT1Q9BV86 223 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 ERVK-6Q9BXR3 956 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 METTL7AQ9H8H3 244 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 MANSC1Q9H8J5 431 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 ACTR8Q9H981 624 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 RYDENQ9NUL5 291 aaKnown RBP9.24□□□□□ -0.93
HDAC3-203ENST00000467533 SYBUQ9NX95 663 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 HEY2Q9UBP5 337 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 TRMT6Q9UJA5 497 aaKnown RBP9.24□□□□□ -0.93
HDAC3-203ENST00000467533 PTBP2Q9UKA9 531 aaKnown RBP9.24□□□□□ -0.93
HDAC3-203ENST00000467533 ERVK-19Q9WJR5 959 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 MAD1L1Q9Y6D9 718 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 SPACA6W5XKT8 324 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 FREM1Q5H8C1 2179 aa9.24□□□□□ -0.93
HDAC3-203ENST00000467533 SYCE3A1L190 88 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 GRID2IPA4D2P6 1211 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 SLC35F4A4IF30 521 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 LRIT2A6NDA9 550 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 FTCDO95954 541 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 CGAP01215 116 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 CREB1P16220 341 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 SLC25A16P16260 332 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 GMPRP36959 345 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 ACTG1P63261 375 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 TPM4P67936 248 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 FUT7Q11130 342 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 NEPROQ6NW34 567 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 CASC4Q6P4E1 433 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 AAGABQ6PD74 315 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 DGAT2L6Q6ZPD8 337 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 PRUNE1Q86TP1 453 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 OR4N5Q8IXE1 308 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 OR2L5Q8NG80 312 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 LILRB1Q8NHL6 650 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-203ENST00000467533 EEF1AKMT1Q8WVE0 214 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 ATG4AQ8WYN0 398 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 NEUROG1Q92886 237 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 PPWD1Q96BP3 646 aaKnown RBP9.23□□□□□ -0.93
HDAC3-203ENST00000467533 SFXN2Q96NB2 322 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 TACO1Q9BSH4 297 aaKnown RBP9.23□□□□□ -0.93
HDAC3-203ENST00000467533 KIFC1Q9BW19 673 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 OR2B2Q9GZK3 357 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 REXO4Q9GZR2 422 aaKnown RBP9.23□□□□□ -0.93
HDAC3-203ENST00000467533 EML4Q9HC35 981 aaKnown RBP9.23□□□□□ -0.93
HDAC3-203ENST00000467533 SERHLQ9NQF3 203 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 SNX15Q9NRS6 342 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 LMBRD1Q9NUN5 540 aa9.23□□□□□ -0.93
HDAC3-203ENST00000467533 MALRD1Q5VYJ5 2156 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 LOC100289279A0A1B0GTE1 492 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 OR6C76A6NM76 312 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 EMC8O43402 210 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 FGF17O60258 216 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 CDH16O75309 829 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 GUCA1CO95843 209 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 CD3EP07766 207 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 ETS1P14921 441 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 ZNF708P17019 499 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 KRT15P19012 456 aa9.22□□□□□ -0.93
HDAC3-203ENST00000467533 HPDP32754 393 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-203ENST00000467533 NPY2RP49146 381 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms