RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SH2D1BO14796 132 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 RIPK2O43353 540 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 TSPAN2O60636 221 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 CEACAM4O75871 244 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 ANXA9O76027 345 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 PRAMEF12O95522 483 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 HPRP00739 348 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 CA3P07451 260 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 ASNSP08243 561 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 RPS2P15880 293 aaKnown RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 PAICSP22234 425 aaKnown RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 MAT2AP31153 395 aaKnown RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 GPR183P32249 361 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 MATKP42679 507 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 NDST1P52848 882 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 PAX9P55771 341 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 CHIT1Q13231 466 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 SNTB2Q13425 540 aaKnown RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 RFTN1Q14699 578 aaPredicted RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 P2RY14Q15391 338 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 CEP55Q53EZ4 464 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 DDI2Q5TDH0 399 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 NIPAL3Q6P499 406 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 ARHGAP11AQ6P4F7 1023 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 SLC39A4Q6P5W5 647 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 ZNF730Q6ZMV8 503 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 DPY19L2P2Q6ZN68 376 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 Q71RC1 249 aaPredicted RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 ERASQ7Z444 233 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 VASH2Q86V25 355 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 VPS36Q86VN1 386 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 APLFQ8IW19 511 aaPredicted RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 OR4N5Q8IXE1 308 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 GVQW1Q8N7I0 195 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 FAM133AQ8N9E0 248 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 OR6F1Q8NGZ6 308 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 OR6S1Q8NH40 331 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 RPLP0P6Q8NHW5 317 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 MAPK15Q8TD08 544 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 GIPC3Q8TF64 312 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 TCP11Q8WWU5 503 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 SHC3Q92529 594 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 RBM24Q9BX46 236 aaKnown RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 PINK1Q9BXM7 581 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 NLNQ9BYT8 704 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 HOXD1Q9GZZ0 328 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 MTHFD2LQ9H903 347 aaPredicted RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 UBE2TQ9NPD8 197 aaPredicted RBP3.56□□□□□ -1.84
SMC4-208ENST00000467468 STARD5Q9NSY2 213 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 CHMP2BQ9UQN3 213 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 KLHDC2Q9Y2U9 406 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 ZNF175Q9Y473 711 aa3.56□□□□□ -1.84
SMC4-208ENST00000467468 SF3B1O75533 1304 aaKnown RBP eCLIP3.55□□□□□ -1.847e-33■■■■■ 320.9
SMC4-208ENST00000467468 A0A087WW49 117 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 C15orf61A6NNL5 157 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 A8MU76 341 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 MEI4A8MW99 385 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 ZNF195O14628 629 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 TBX19O60806 448 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 PALMO75781 387 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 STK17BO94768 372 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 OR4F21O95013 312 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 CALCAP01258 141 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 SERPINB2P05120 415 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 HMBSP08397 361 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 PRSS56P0CW18 603 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 MBL2P11226 248 aaPredicted RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 CYP11B1P15538 503 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 DRD5P21918 477 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 AXLP30530 894 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 PTGFRP43088 359 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 ZFP36L2P47974 494 aaKnown RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 SLC1A6P48664 564 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 RPS4XP62701 263 aaKnown RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 NAAAQ02083 359 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 LRRC74AQ0VAA2 488 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 GPM6BQ13491 265 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 ZKSCAN8Q15776 578 aaPredicted RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 HAGHQ16775 308 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 SPATA46Q5T0L3 261 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 DCAF12Q5T6F0 453 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 NCR3LG1Q68D85 454 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 FAM53AQ6NSI3 398 aaPredicted RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 FIP1L1Q6UN15 594 aaKnown RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 GPR142Q7Z601 462 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 HOGA1Q86XE5 327 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 GRAMD2AQ8IUY3 354 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 ZDHHC21Q8IVQ6 265 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 RAB42Q8N4Z0 105 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 ZNF248Q8NDW4 579 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 OR9Q2Q8NGE9 314 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 WDR36Q8NI36 951 aaKnown RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 LIPHQ8WWY8 451 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 SLC25A36Q96CQ1 311 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 ZNF486Q96H40 463 aaPredicted RBP3.55□□□□□ -1.84
SMC4-208ENST00000467468 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 CAPNS2Q96L46 248 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 IWS1Q96ST2 819 aa3.55□□□□□ -1.84
SMC4-208ENST00000467468 TMEM117Q9H0C3 514 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms