RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 EFHD2Q96C19 240 aaPredicted RBP9.48□□□□□ -0.89
PMF1-204ENST00000466489 CLIP3Q96DZ5 547 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 ZNF583Q96ND8 569 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 MUS81Q96NY9 551 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 SEPHS2Q99611 448 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 CTRCQ99895 268 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 NDC1Q9BTX1 674 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 PITHD1Q9GZP4 211 aaPredicted RBP9.48□□□□□ -0.89
PMF1-204ENST00000466489 KAT8Q9H7Z6 458 aaKnown RBP9.48□□□□□ -0.89
PMF1-204ENST00000466489 IL1RAPQ9NPH3 570 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 ASCL3Q9NQ33 180 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 IKZF3Q9UKT9 509 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 ZNF490Q9ULM2 529 aaPredicted RBP9.48□□□□□ -0.89
PMF1-204ENST00000466489 SLC22A14Q9Y267 594 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 ZNF451Q9Y4E5 1061 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 UGT2A1Q9Y4X1 527 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 PCDHGB3Q9Y5G1 929 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 B3GALT1Q9Y5Z6 326 aa9.48□□□□□ -0.89
PMF1-204ENST00000466489 SDK2Q58EX2 2172 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 ZNF99A8MXY4 864 aaPredicted RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 H7BY64 318 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 DLGAP1O14490 977 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 ANKRD28O15084 1053 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 ZSCAN9O15535 394 aaPredicted RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 TPST1O60507 370 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 JRKO75564 520 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 CREG1O75629 220 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 STK17BO94768 372 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 OR4F21O95013 312 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 SNAP29O95721 258 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 SLC35G6P0C7Q6 338 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 LIPCP11150 499 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 NPPBP16860 134 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 AGXTP21549 392 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 CD40LGP29965 261 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 KRT20P35900 424 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 GMPRP36959 345 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 HNF4AP41235 474 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 MAGEA2P43356 314 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 KIR3DL1P43629 444 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 SLC6A12P48065 614 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 CD97P48960 835 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 EMP3P54852 163 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 RBBP4Q09028 425 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 FADDQ13158 208 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 PMS2P3Q13401 168 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 LAPTM5Q13571 262 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 TRIM16LQ309B1 348 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 DEFB110Q30KQ9 67 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 FAM214AQ32MH5 1076 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 RABL3Q5HYI8 236 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 TOR1AIP1Q5JTV8 583 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 OTUD3Q5T2D3 398 aaPredicted RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 ZNF425Q6IV72 752 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 RNF44Q7L0R7 432 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 R3HCC1LQ7Z5L2 792 aaKnown RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 PAQR7Q86WK9 346 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 EPHX4Q8IUS5 362 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 FAM20CQ8IXL6 584 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 KLHDC8AQ8IYD2 350 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 SPARTQ8N0X7 666 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 DNAJC22Q8N4W6 341 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 DTWD1Q8N5C7 304 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 IL22RA1Q8N6P7 574 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 L3MBTL4Q8NA19 623 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 ABHD11Q8NFV4 315 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 TTLQ8NG68 377 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 OR4F6Q8NGB9 312 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 SNIP1Q8TAD8 396 aaKnown RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 RNF217Q8TC41 542 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 CHTF18Q8WVB6 975 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 NEIL2Q969S2 332 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 KIAA1143Q96AT1 154 aaPredicted RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 ZNF501Q96CX3 271 aaPredicted RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 CRELD1Q96HD1 420 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 PRAP1Q96NZ9 151 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 C17orf62Q9BQA9 187 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 DPH2Q9BQC3 489 aaPredicted RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 SLC39A3Q9BRY0 314 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 MMP27Q9H306 513 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 EHD1Q9H4M9 534 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 PELI2Q9HAT8 420 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 BRF2Q9HAW0 419 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 APMAPQ9HDC9 416 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 SLC6A20Q9NP91 592 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 ACSL6Q9UKU0 697 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 RUVBL1Q9Y265 456 aaKnown RBP9.47□□□□□ -0.89
PMF1-204ENST00000466489 ERGIC3Q9Y282 383 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 KLHL20Q9Y2M5 609 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 NAALAD2Q9Y3Q0 740 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 SEC16AO15027 2179 aa9.47□□□□□ -0.89
PMF1-204ENST00000466489 TPRP12270 2363 aaKnown RBP9.46□□□□□ -0.89
PMF1-204ENST00000466489 SPEGQ15772 3267 aa9.46□□□□□ -0.89
PMF1-204ENST00000466489 A0A1W2PNU3 283 aaPredicted RBP9.46□□□□□ -0.9
PMF1-204ENST00000466489 TRBC2A0A5B9 178 aa9.46□□□□□ -0.9
PMF1-204ENST00000466489 PMS2P1A4D2B8 440 aa9.46□□□□□ -0.9
PMF1-204ENST00000466489 URADA6NGE7 173 aa9.46□□□□□ -0.9
PMF1-204ENST00000466489 CLDN24A6NM45 220 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms