RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 CAPGP40121 348 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 HERV-K104P63124 156 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 HERVK_113P63132 956 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 ERVK-8P63133 956 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 MYBPC1Q00872 1141 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 IL1RL1Q01638 556 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 CALCOCO2Q13137 446 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 MSLNQ13421 630 aaPredicted RBP2.57□□□□□ -2
GARNL3-213ENST00000464616 PDK1Q15118 436 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 MUC21Q5SSG8 566 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 C12orf60Q5U649 245 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 FAM159AQ6UWV7 190 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 ARSKQ6UWY0 536 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 GPR142Q7Z601 462 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 FAM71CQ8NEG0 241 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 NEK11Q8NG66 645 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 OR56B1Q8NGI3 324 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 DQX1Q8TE96 717 aaKnown RBP2.57□□□□□ -2
GARNL3-213ENST00000464616 C11orf52Q96A22 123 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 RBM18Q96H35 190 aaKnown RBP2.57□□□□□ -2
GARNL3-213ENST00000464616 ERGIC2Q96RQ1 377 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 TSPAN18Q96SJ8 248 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 CBWD1Q9BRT8 395 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 ERVK-6Q9BXR3 956 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 PUS3Q9BZE2 481 aaKnown RBP2.57□□□□□ -2
GARNL3-213ENST00000464616 HSD3B7Q9H2F3 369 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 GTSE1Q9NYZ3 720 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 THYN1Q9P016 225 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 ACTR3BQ9P1U1 418 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 COPS7AQ9UBW8 275 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 TUBGCP4Q9UGJ1 667 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 BAIAP2L1Q9UHR4 511 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 DIMT1Q9UNQ2 313 aaKnown RBP2.57□□□□□ -2
GARNL3-213ENST00000464616 PLA2G4CQ9UP65 541 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 SLC9A8Q9Y2E8 581 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 PLEKHA6Q9Y2H5 1048 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 AUP1Q9Y679 476 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.57□□□□□ -2
GARNL3-213ENST00000464616 SPATA31D1Q6ZQQ2 1576 aa2.57□□□□□ -2
GARNL3-213ENST00000464616 NPIPA5A0A0B4J1W7 369 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 IGHV3-20A0A0C4DH32 117 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 OR5H15A6NDH6 313 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 NPIPA5E9PKD4 350 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 NPIPB9F8W1W9 429 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 RTCAO00442 366 aaKnown RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 FBP2O00757 339 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 SOCS3O14543 225 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 CLDN3O15551 220 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 B4GAT1O43505 415 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 B3GALNT1O75752 331 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 TXNDC12O95881 172 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 PRG2P13727 222 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 ETS1P14921 441 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 GNSP15586 552 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 DESP17661 470 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 GJB2P29033 226 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 PPP2R1BP30154 601 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 PITPNBP48739 271 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 RPL34P49207 117 aaKnown RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 CCL11P51671 97 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 FKBP3Q00688 224 aaKnown RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 NFATC2Q13469 925 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 P2RY14Q15391 338 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 PKN2Q16513 984 aaKnown RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 SEL1L3Q68CR1 1132 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 RAET1GQ6H3X3 334 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 IRGCQ6NXR0 463 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 Q6ZR54 194 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 CATSPER4Q7RTX7 472 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 GOLGA7Q7Z5G4 137 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 ADAMTSL2Q86TH1 951 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 YRDCQ86U90 279 aaKnown RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 SLC22A16Q86VW1 577 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 PHC2Q8IXK0 858 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 ELMOD2Q8IZ81 293 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 PARP8Q8N3A8 854 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 ARL14Q8N4G2 192 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 TEX9Q8N6V9 391 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 LRRC17Q8N6Y2 441 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 RNF148Q8N7C7 305 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 BANPQ8N9N5 519 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 GPR148Q8TDV2 347 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 PCNPQ8WW12 178 aaKnown RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 MRPL24Q96A35 216 aaKnown RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 C16orf58Q96GQ5 468 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 PCED1BQ96HM7 432 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 CXorf58Q96LI9 332 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 GPA33Q99795 319 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 COQ7Q99807 217 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 FICDQ9BVA6 458 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 OCR1Q9BZK8 76 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 ELL3Q9HB65 397 aaPredicted RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 TECRQ9NZ01 308 aaKnown RBP2.56□□□□□ -2
GARNL3-213ENST00000464616 SPASTQ9UBP0 616 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 FETUBQ9UGM5 382 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 MGAT4AQ9UM21 535 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 U3KQV3 271 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 AFF2P51816 1311 aa2.56□□□□□ -2
GARNL3-213ENST00000464616 IGHV3-38A0A0C4DH36 116 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms