RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TENM4Q6N022 2769 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 TRBV11-1A0A0K0K1C0 115 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 ANKRD28O15084 1053 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 TGDSO95455 350 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 PRB1P04280 392 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 NT5EP21589 574 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 IDH3AP50213 366 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 CLDN8P56748 225 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 AP2B1P63010 937 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 FUT7Q11130 342 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 MAP4K2Q12851 820 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 LTB4RQ15722 352 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 IRAK1BP1Q5VVH5 260 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 ISLR2Q6UXK2 745 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 LINC00696Q6ZRV3 163 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 ASB18Q6ZVZ8 466 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 ARMC10Q8N2F6 343 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 LRRC25Q8N386 305 aaPredicted RBP17.61■□□□□ 0.41
LMNB1-204ENST00000463908 SIMC1Q8NDZ2 872 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 OR7A2PQ8NGA2 310 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 CTHRC1Q96CG8 243 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 MTERF3Q96E29 417 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 ZNF764Q96H86 408 aaPredicted RBP17.61■□□□□ 0.41
LMNB1-204ENST00000463908 EBF4Q9BQW3 602 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 CNPPD1Q9BV87 410 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 DEFB126Q9BYW3 111 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 CDCP1Q9H5V8 836 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 CCDC134Q9H6E4 229 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 LIN28AQ9H9Z2 209 aaKnown RBP17.61■□□□□ 0.41
LMNB1-204ENST00000463908 STMN3Q9NZ72 180 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 MAT2BQ9NZL9 334 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 ERVK-19Q9WJR5 959 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 PCDHGB7Q9Y5F8 929 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 DOCK10Q96BY6 2186 aa17.61■□□□□ 0.41
LMNB1-204ENST00000463908 DIAPH2O60879 1101 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 SFTPCP11686 197 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 SSTR4P31391 388 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 CD97P48960 835 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 ST13P50502 369 aaKnown RBP17.6■□□□□ 0.41
LMNB1-204ENST00000463908 AQP5P55064 265 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 C21orf58P58505 322 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 MFAP5Q13361 173 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 LSM12Q3MHD2 195 aaKnown RBP17.6■□□□□ 0.41
LMNB1-204ENST00000463908 TRMT12Q53H54 448 aaKnown RBP17.6■□□□□ 0.41
LMNB1-204ENST00000463908 ZNF628Q5EBL2 1059 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 ACER2Q5QJU3 275 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 IGFL3Q6UXB1 125 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 SPATA19Q7Z5L4 167 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 RPS19BP1Q86WX3 136 aaKnown RBP17.6■□□□□ 0.41
LMNB1-204ENST00000463908 GALNT12Q8IXK2 581 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 SAMD14Q8IZD0 417 aaPredicted RBP17.6■□□□□ 0.41
LMNB1-204ENST00000463908 ZNF615Q8N8J6 731 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 OR9A2Q8NGT5 310 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 CEP70Q8NHQ1 597 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 CIDECQ96AQ7 238 aaPredicted RBP17.6■□□□□ 0.41
LMNB1-204ENST00000463908 PPCDCQ96CD2 204 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 COQ8BQ96D53 544 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 THOC1Q96FV9 657 aaKnown RBP17.6■□□□□ 0.41
LMNB1-204ENST00000463908 BBS4Q96RK4 519 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 GLIPR2Q9H4G4 154 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 PLA2G3Q9NZ20 509 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 SH3BP4Q9P0V3 963 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 ZNF451Q9Y4E5 1061 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 GPR45Q9Y5Y3 372 aa17.6■□□□□ 0.41
LMNB1-204ENST00000463908 SCAMP2O15127 329 aaKnown RBP17.59■□□□□ 0.41
LMNB1-204ENST00000463908 KLHL41O60662 606 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 ZFAND5O76080 213 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 LAMP1P11279 417 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 PRPS1L1P21108 318 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 MPIP34949 423 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 FRKP42685 505 aaPredicted RBP17.59■□□□□ 0.41
LMNB1-204ENST00000463908 SLC37A1P57057 533 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 MLF1P58340 268 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 RNF4P78317 190 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 MRPS35P82673 323 aaKnown RBP17.59■□□□□ 0.41
LMNB1-204ENST00000463908 DUSP8Q13202 625 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 LACTB2Q53H82 288 aaPredicted RBP17.59■□□□□ 0.41
LMNB1-204ENST00000463908 TMEM198Q66K66 360 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 NXNQ6DKJ4 435 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 HSDL2Q6YN16 418 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 C16orf47Q6ZP98 133 aaPredicted RBP17.59■□□□□ 0.41
LMNB1-204ENST00000463908 C9orf40Q8IXQ3 194 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 THAP3Q8WTV1 239 aaPredicted RBP17.59■□□□□ 0.41
LMNB1-204ENST00000463908 SLC39A7Q92504 469 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 ZNF354BQ96LW1 612 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 AMDHD1Q96NU7 426 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 BRINP2Q9C0B6 783 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 ANKRA2Q9H9E1 313 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 GIMAP4Q9NUV9 329 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 AIG1Q9NVV5 245 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 G3BP2Q9UN86 482 aaKnown RBP17.59■□□□□ 0.41
LMNB1-204ENST00000463908 ENTPD4Q9Y227 616 aa17.59■□□□□ 0.41
LMNB1-204ENST00000463908 TNRC6AQ8NDV7 1962 aaKnown RBP17.59■□□□□ 0.41
LMNB1-204ENST00000463908 DYRK3O43781 588 aa17.58■□□□□ 0.4
LMNB1-204ENST00000463908 C1QL1O75973 258 aa17.58■□□□□ 0.4
LMNB1-204ENST00000463908 ALPPP05187 535 aa17.58■□□□□ 0.4
LMNB1-204ENST00000463908 PCSK2P16519 638 aa17.58■□□□□ 0.4
LMNB1-204ENST00000463908 ZNF551Q7Z340 670 aaPredicted RBP17.58■□□□□ 0.4
LMNB1-204ENST00000463908 R3HCC1LQ7Z5L2 792 aaKnown RBP17.58■□□□□ 0.4
LMNB1-204ENST00000463908 SLC5A8Q8N695 610 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms