RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.45
NUP58-206ENST00000463407 CCNKO75909 580 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 ARPC4P59998 168 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 CRYZQ08257 329 aaKnown RBP12.21□□□□□ -0.45
NUP58-206ENST00000463407 SLC5A8Q8N695 610 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 BORCS8Q96FH0 119 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 FAM129BQ96TA1 746 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 SMURF1Q9HCE7 757 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 PCDHB16Q9NRJ7 776 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 VNN3Q9NY84 501 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 TBC1D24Q9ULP9 559 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 USP3Q9Y6I4 520 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 SLX4Q8IY92 1834 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 EIF3FO00303 357 aaPredicted RBP12.21□□□□□ -0.45
NUP58-206ENST00000463407 FAM189A1O60320 539 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 MGAT3Q09327 533 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 FAM180BQ6P0A1 224 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 LCTLQ6UWM7 567 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 ALDH16A1Q8IZ83 802 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 BOLLQ8N9W6 283 aaKnown RBP12.21□□□□□ -0.45
NUP58-206ENST00000463407 OR51A7Q8NH64 312 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 PCTPQ9UKL6 214 aa12.21□□□□□ -0.45
NUP58-206ENST00000463407 CLDN25C9JDP6 229 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 SOCS2O14508 198 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 AURKAO14965 403 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 SLC22A1O15245 554 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 CSNK1DP48730 415 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.46
NUP58-206ENST00000463407 TCEANCQ8N8B7 351 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 PIP5K1AQ99755 562 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 HOXD1Q9GZZ0 328 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 ZNF639Q9UID6 485 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 ZCWPW2A0A1B0GU75 182 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 AQP9O43315 295 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 MTRF1O75570 445 aaKnown RBP12.21□□□□□ -0.46
NUP58-206ENST00000463407 KDM4BO94953 1096 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 C8BP07358 591 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 GLI3P10071 1580 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 KDELC1Q6UW63 502 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 PRR22Q8IZ63 422 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 SGTBQ96EQ0 304 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 FRMD6Q96NE9 622 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 KCMF1Q9P0J7 381 aa12.21□□□□□ -0.46
NUP58-206ENST00000463407 PRAMEF33A0A0G2JMD5 474 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 HSPA12AO43301 675 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 PRAMEF10O60809 474 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 PGBD2Q6P3X8 592 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 HS6ST2Q96MM7 605 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 DPH2Q9BQC3 489 aaPredicted RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 MKLN1Q9UL63 735 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 SRPK3Q9UPE1 567 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 RPH3AQ9Y2J0 694 aaPredicted RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 H3BNC9 293 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 IRF2P14316 349 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 CDH15P55291 814 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 EEF1A2Q05639 463 aaKnown RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 EXOC3L2Q2M3D2 409 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 CES4AQ5XG92 561 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 NADSYN1Q6IA69 706 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 COMMD6Q7Z4G1 85 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 THAP4Q8WY91 577 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 NINJ1Q92982 152 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 MSLNLQ96KJ4 702 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 EHD1Q9H4M9 534 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 POLE3Q9NRF9 147 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 C5AR2Q9P296 337 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 METTL21EPA6NDL7 271 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ANHXE9PGG2 379 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 KIAA0355O15063 1070 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 PPP1R3BQ86XI6 285 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ZSWIM9Q86XI8 627 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 FBXO9Q9UK97 447 aaPredicted RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 SLC35F4A4IF30 521 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 FAAHO00519 579 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 IRS1P35568 1242 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 SH3BP2P78314 561 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 MALLQ13021 153 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 GINS1Q14691 196 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 VMACQ2NL98 169 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ZNF782Q6ZMW2 699 aaPredicted RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 ANKRD33Q7Z3H0 272 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 GPR149Q86SP6 731 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ISCA2Q86U28 154 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 PDSS2Q86YH6 399 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ZNF565Q8N9K5 539 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ZNF548Q8NEK5 533 aaPredicted RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 FAM174AQ8TBP5 190 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 MSANTD3Q96H12 275 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ACTRT3Q9BYD9 372 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 SRA1Q9HD15 236 aaKnown RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 PRSS16Q9NQE7 514 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 SH3BGRL2Q9UJC5 107 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ZNF16P17020 682 aaPredicted RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 DSG2Q14126 1118 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 MAD2L1BPQ15013 274 aaPredicted RBP12.2□□□□□ -0.46
NUP58-206ENST00000463407 FAM189A2Q15884 450 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ATP6AP1Q15904 470 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 TYSND1Q2T9J0 566 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 ZFP69Q49AA0 526 aa12.2□□□□□ -0.46
NUP58-206ENST00000463407 GPR150Q8NGU9 434 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms