RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 RBM22Q9NW64 420 aaKnown RBP eCLIP8.28□□□□□ -1.08
SHQ1-203ENST00000463369 ZNF224Q9NZL3 707 aa8.28□□□□□ -1.08
SHQ1-203ENST00000463369 POLR3HQ9Y535 204 aaPredicted RBP8.28□□□□□ -1.08
SHQ1-203ENST00000463369 BRWD1Q9NSI6 2320 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 IQCMA0A1B0GVH7 501 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 PRR23AA6NEV1 266 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 PCP4L1A6NKN8 68 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 SEMG1P04279 462 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 IL6P05231 212 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 RHOP08100 348 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 RPS3P23396 243 aaKnown RBP eCLIP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 GRNP28799 593 aaKnown RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 GPC1P35052 558 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 CCR2P41597 374 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 PXNP49023 591 aaPredicted RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 ACY1Q03154 408 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 RUNX1T1Q06455 604 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 MED22Q15528 200 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 TSNQ15631 228 aaKnown RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 HKDC1Q2TB90 917 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 IER5LQ5T953 404 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 TXNDC8Q6A555 127 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 TYW3Q6IPR3 259 aaKnown RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 METTL2BQ6P1Q9 378 aaKnown RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 ZNF574Q6ZN55 896 aaPredicted RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 ZNF605Q86T29 641 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 GPAT4Q86UL3 456 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 MIB1Q86YT6 1006 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 ARHGAP12Q8IWW6 846 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 FAM160A2Q8N612 972 aaPredicted RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 METTL6Q8TCB7 284 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 MRPS31Q92665 395 aaKnown RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 FUBP1Q96AE4 644 aaKnown RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 CNTNAP3BQ96NU0 1288 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 QRFPRQ96P65 431 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 ZNF382Q96SR6 550 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 CDCA4Q9BXL8 241 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 CNTNAP3Q9BZ76 1288 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 PPIL3Q9H2H8 161 aaKnown RBP8.27□□□□□ -1.09
SHQ1-203ENST00000463369 CATSPERBQ9H7T0 1116 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 REEP1Q9H902 201 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 ZC4H2Q9NQZ6 224 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 GLRX2Q9NS18 164 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 MCUBQ9NWR8 336 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 TAS2R3Q9NYW6 316 aa8.27□□□□□ -1.09
SHQ1-203ENST00000463369 NCF1BA6NI72 391 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 NCF1CA8MVU1 366 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 CDC7O00311 574 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 NRG2O14511 850 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 ZNF197O14709 1029 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 KCNJ13O60928 360 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 MOSPD3O75425 235 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 C9P02748 559 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 TP53P04637 393 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 QDPRP09417 244 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 GABRB1P18505 474 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 DDX6P26196 483 aaKnown RBP eCLIP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 CBX5P45973 191 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 HTR6P50406 440 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 VLDLRP98155 873 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 CYP4F8P98187 520 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 PCDH1Q08174 1060 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 DBPQ10586 325 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 PTGR1Q14914 329 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 LARS2Q15031 903 aaKnown RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 GRK1Q15835 563 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 SPANXN4Q5MJ08 99 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 LCN1P1Q5VSP4 162 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 ZCCHC12Q6PEW1 402 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 PAQR3Q6TCH7 311 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 GDPGP1Q6ZNW5 385 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 IKBIPQ70UQ0 350 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 C16orf62Q7Z3J2 963 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 GRASPQ7Z6J2 395 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 FAM124AQ86V42 546 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 COMMD7Q86VX2 200 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 ZZZ3Q8IYH5 903 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 C12orf76Q8N812 135 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 ZNF366Q8N895 744 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 DCBLD1Q8N8Z6 715 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 DENND6BQ8NEG7 585 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 LPCAT1Q8NF37 534 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 DNAJB8Q8NHS0 232 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 FAM216AQ8WUB2 273 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 SMG7Q92540 1137 aaKnown RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 TCEAL4Q96EI5 215 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 HSH2DQ96JZ2 352 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 CDK15Q96Q40 435 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 SLC22A12Q96S37 553 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 CPPED1Q9BRF8 314 aaPredicted RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 UQCC2Q9BRT2 126 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 MIXL1Q9H2W2 232 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 ABCB9Q9NP78 766 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 RAD18Q9NS91 495 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 SLC6A13Q9NSD5 602 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 NDFIP2Q9NV92 336 aa8.26□□□□□ -1.09
SHQ1-203ENST00000463369 THUMPD1Q9NXG2 353 aaKnown RBP8.26□□□□□ -1.09
SHQ1-203ENST00000463369 MRPL39Q9NYK5 338 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms