RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ACSL3O95573 720 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 GPR75O95800 540 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 S100BP04271 92 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-209ENST00000463244 BUD31P41223 144 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-209ENST00000463244 RPL21P46778 160 aaKnown RBP18.98■□□□□ 0.63
CPSF7-209ENST00000463244 FBXW4P57775 412 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 DR1Q01658 176 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 FNDC7Q5VTL7 733 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 TMEM64Q6YI46 380 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 Q71RC1 249 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-209ENST00000463244 KRTAP1-3Q8IUG1 177 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 MBD3L2Q8NHZ7 208 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-209ENST00000463244 EXT2Q93063 718 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 UBXN10Q96LJ8 280 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 RILPQ96NA2 401 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 NEUROD4Q9HD90 331 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 ADGRE2Q9UHX3 823 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 C15orf41Q9Y2V0 281 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 SLC6A5Q9Y345 797 aa18.98■□□□□ 0.63
CPSF7-209ENST00000463244 WASHC1A8K0Z3 465 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 CLCA1A8K7I4 914 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 CAPN14A8MX76 684 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 SNX4O95219 450 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 IL18BPO95998 194 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 STMN1P16949 149 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 CTSSP25774 331 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 GALNSP34059 522 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 OPRM1P35372 400 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 RAP1GDS1P52306 607 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 AGFG1P52594 562 aaKnown RBP18.97■□□□□ 0.63
CPSF7-209ENST00000463244 ARFIP1P53367 373 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 DCAF7P61962 342 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 DDX39BQ13838 428 aaKnown RBP18.97■□□□□ 0.63
CPSF7-209ENST00000463244 ZKSCAN8Q15776 578 aaPredicted RBP18.97■□□□□ 0.63
CPSF7-209ENST00000463244 CAPN12Q6ZSI9 719 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 KLHL7Q8IXQ5 586 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 ZBED8Q8IZ13 594 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 HUS1BQ8NHY5 278 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 SPPL2AQ8TCT8 520 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 GNRHR2Q96P88 292 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 TRIB1Q96RU8 372 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 SECISBP2Q96T21 854 aaKnown RBP18.97■□□□□ 0.63
CPSF7-209ENST00000463244 GPR22Q99680 433 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 CENPKQ9BS16 269 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 ZNF717Q9BY31 904 aaPredicted RBP18.97■□□□□ 0.63
CPSF7-209ENST00000463244 UGT2B28Q9BY64 529 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 ANGPTL4Q9BY76 406 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 NUDT4Q9NZJ9 180 aa18.97■□□□□ 0.63
CPSF7-209ENST00000463244 C2orf92A0A1B0GVN3 265 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 CXorf49A8MYA2 514 aaPredicted RBP18.96■□□□□ 0.63
CPSF7-209ENST00000463244 EEF1E1-BLOC1S5C9J1V9 151 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 EEF1E1O43324 174 aaKnown RBP18.96■□□□□ 0.63
CPSF7-209ENST00000463244 INHBBP09529 407 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 BMP7P18075 431 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 PIK3CBP42338 1070 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 MASP1P48740 699 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 CBLBQ13191 982 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 DCST1Q5T197 706 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 MRM1Q6IN84 353 aaKnown RBP18.96■□□□□ 0.63
CPSF7-209ENST00000463244 GRHL2Q6ISB3 625 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 PACS2Q86VP3 889 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 UBTD2Q8WUN7 234 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 TP53INP1Q96A56 240 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 WDYHV1Q96HA8 205 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 RBBP8Q99708 897 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 ALG9Q9H6U8 611 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 CALHM2Q9HA72 323 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 SNX15Q9NRS6 342 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 OPTCQ9UBM4 332 aa18.96■□□□□ 0.63
CPSF7-209ENST00000463244 MED12LQ86YW9 2145 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 K7EPI3 171 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 HRGP04196 525 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 CD53P19397 219 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 ADSLP30566 484 aaPredicted RBP18.95■□□□□ 0.62
CPSF7-209ENST00000463244 RAB10P61026 200 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 STAG3L4Q8TBR4 150 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 CDKL2Q92772 493 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 MTERF1Q99551 399 aaKnown RBP18.95■□□□□ 0.62
CPSF7-209ENST00000463244 CPNE1Q99829 537 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 YIPF4Q9BSR8 244 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 TRIM31Q9BZY9 425 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 BEX4Q9NWD9 120 aaPredicted RBP18.95■□□□□ 0.62
CPSF7-209ENST00000463244 LYARQ9NX58 379 aaKnown RBP18.95■□□□□ 0.62
CPSF7-209ENST00000463244 TEX10Q9NXF1 929 aaPredicted RBP18.95■□□□□ 0.62
CPSF7-209ENST00000463244 TXNDC16Q9P2K2 825 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 TSC22D4Q9Y3Q8 395 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 ASB4Q9Y574 426 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 NPFFR2Q9Y5X5 522 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 CSPG4Q6UVK1 2322 aa18.95■□□□□ 0.62
CPSF7-209ENST00000463244 A0A0A6YYD5 115 aa18.94■□□□□ 0.62
CPSF7-209ENST00000463244 A0A1W2PPR1 153 aa18.94■□□□□ 0.62
CPSF7-209ENST00000463244 A0A1W2PR48 441 aa18.94■□□□□ 0.62
CPSF7-209ENST00000463244 GLOD5A6NK44 160 aa18.94■□□□□ 0.62
CPSF7-209ENST00000463244 TMPRSS11DO60235 418 aa18.94■□□□□ 0.62
CPSF7-209ENST00000463244 EEDO75530 441 aaKnown RBP18.94■□□□□ 0.62
CPSF7-209ENST00000463244 SLC35E2BP0CK96 405 aa18.94■□□□□ 0.62
CPSF7-209ENST00000463244 SLC35E2P0CK97 266 aa18.94■□□□□ 0.62
CPSF7-209ENST00000463244 NR2F6P10588 404 aa18.94■□□□□ 0.62
CPSF7-209ENST00000463244 TCP1P17987 556 aaKnown RBP18.94■□□□□ 0.62
CPSF7-209ENST00000463244 SSTR4P31391 388 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms