RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 CTSLP07711 333 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 TIA1P31483 386 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 RNF144AP50876 292 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ERVFC1P60507 584 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 MPEG1Q2M385 716 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 IL20RBQ6UXL0 311 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 HSD11B1LQ7Z5J1 315 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 AMIGO1Q86WK6 493 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 CACUL1Q86Y37 369 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 SLC30A8Q8IWU4 369 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 OR8H1Q8NGG4 311 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 OR5D16Q8NGK9 328 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 OR4C15Q8NGM1 316 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 WDR20Q8TBZ3 569 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ARPC5LQ9BPX5 153 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ZNF717Q9BY31 904 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 QRSL1Q9H0R6 528 aaKnown RBP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 MIXL1Q9H2W2 232 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ATG2AQ2TAZ0 1938 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 TRAV6A0A075B6T7 132 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 A0A0G2JMP0 313 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 SCO2O43819 266 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 SLCO2B1O94956 709 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 SCG5P05408 212 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ATXN8OSP0DMR3 200 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 IFNA8P32881 189 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 HNMTP50135 292 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 MVDP53602 400 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 CTBP2P56545 445 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 EFR3AQ14156 821 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 HEPACAMQ14CZ8 416 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 TCEA2Q15560 299 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ZNF284Q2VY69 593 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ANXA8L1Q5VT79 327 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 MTFR2Q6P444 385 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 GDPD4Q6W3E5 623 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 CFAP206Q8IYR0 622 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 CCDC120Q96HB5 630 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 TBX5Q99593 518 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ITM2BQ9Y287 266 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 KCNE2Q9Y6J6 123 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ENPP4Q9Y6X5 453 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 CD8B2A6NJW9 211 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 HIDE1A8MVS5 230 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 DVL2O14641 736 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 CCL16O15467 120 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 CRYZL1O95825 349 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ADH1AP07327 375 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 CD8BP10966 210 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ZNF30P17039 623 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 DDX6P26196 483 aaKnown RBP eCLIP11.79□□□□□ -0.524e-7■■■□□ 14.7
HDAC4-208ENST00000463007 MANFP55145 182 aaKnown RBP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 EIF4HQ15056 248 aaKnown RBP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 WSCD2Q2TBF2 565 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 DDI2Q5TDH0 399 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 TRMT11Q7Z4G4 463 aaKnown RBP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 IRF7Q92985 503 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 REEP4Q9H6H4 257 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 FKBP14Q9NWM8 211 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 STUB1Q9UNE7 303 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ALG5Q9Y673 324 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 PLA2G10O15496 165 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 DDOSTP39656 456 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 OPRD1P41143 372 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 XCR1P46094 333 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 C21orf58P58505 322 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 DSTNP60981 165 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 SRP54P61011 504 aaKnown RBP11.78□□□□□ -0.52
HDAC4-208ENST00000463007 GINS1Q14691 196 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 CNIH2Q6PI25 160 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 PRR23CQ6ZRP0 262 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 KRT74Q7RTS7 529 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 TECPR1Q7Z6L1 1165 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 LAPTM4BQ86VI4 370 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 TRAPPC5Q8IUR0 188 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 SLC38A6Q8IZM9 456 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 HORMAD2Q8N7B1 307 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 UCN3Q969E3 161 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 TBC1D20Q96BZ9 403 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 REPS1Q96D71 796 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 ARSGQ96EG1 525 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 SLC6A18Q96N87 628 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 SEC14L3Q9UDX4 400 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 SLC25A13Q9UJS0 675 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 PCDHGB2Q9Y5G2 931 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 HCFC2Q9Y5Z7 792 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 SZT2Q5T011 3432 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 CENPBD1B2RD01 187 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 SEMA7AO75326 666 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 UGT2B17O75795 530 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 OR2B3O76000 313 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 CXCL14O95715 111 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 SYPP08247 313 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 ACRP10323 421 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 MYL12AP19105 171 aa11.78□□□□□ -0.52
HDAC4-208ENST00000463007 CELP19835 753 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms