RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 C1QL1O75973 258 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 EML2O95834 649 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 WNT1P04628 370 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 NPSP0C0P6 89 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 CTSEP14091 401 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 NPPBP16860 134 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 AVPR2P30518 371 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 HTR6P50406 440 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 BLKP51451 505 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 TBPL1P62380 186 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 CYP4F2P78329 520 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 IRF8Q02556 426 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 CSTF1Q05048 431 aaKnown RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 CHIT1Q13231 466 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 FASTKQ14296 549 aaKnown RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 ARHGAP19Q14CB8 494 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 KRT72Q14CN4 511 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 GGTA1PQ4G0N0 100 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 ZNF542PQ5EBM4 170 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 XKR6Q5GH73 641 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 WDR45BQ5MNZ6 344 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 TCHHL1Q5QJ38 904 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 LIPJQ5W064 366 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 FAM91A1Q658Y4 838 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 TMEM198Q66K66 360 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 DUS1LQ6P1R4 473 aaKnown RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 SLC30A9Q6PML9 568 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 IL27RAQ6UWB1 636 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 SUSD1Q6UWL2 747 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 WDR5BQ86VZ2 330 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 PARGQ86W56 976 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 MAML2Q8IZL2 1156 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 RAB42Q8N4Z0 105 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 C2orf73Q8N5S3 287 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 BOLLQ8N9W6 283 aaKnown RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 LMNTD1Q8N9Z9 388 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 L3MBTL4Q8NA19 623 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 FAM98AQ8NCA5 519 aaKnown RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 DNASE2BQ8WZ79 361 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 CTHRC1Q96CG8 243 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 TUBGCP3Q96CW5 907 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 NSL1Q96IY1 281 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 CATSPER2Q96P56 530 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 OR4K3Q96R72 315 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 TIMP4Q99727 224 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 CCDC106Q9BWC9 280 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 GSDMCQ9BYG8 508 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 KRTAP4-2Q9BYR5 136 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 SLC29A3Q9BZD2 475 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 TCEAL2Q9H3H9 227 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 TM9SF3Q9HD45 589 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 CCDC177Q9NQR7 707 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 PRMT8Q9NR22 394 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-204ENST00000462658 ARL8BQ9NVJ2 186 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 SNX6Q9UNH7 406 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 PTGDR2Q9Y5Y4 395 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 KCNE2Q9Y6J6 123 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 COLEC10Q9Y6Z7 277 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 EML5Q05BV3 1969 aa6.98□□□□□ -1.29
UBE4B-204ENST00000462658 KCNE1BA0A087WTH5 132 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 A6NCN8 305 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 LRRC3CA6NJW4 275 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ANKRD65E5RJM6 399 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 E7EQ34 232 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 SLC28A1O00337 649 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 RGS14O43566 566 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 PEX11AO75192 247 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 CBX6O95503 412 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 IGLV2-14P01704 120 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 KRT6AP02538 564 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 KRT6BP04259 564 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 T-ENOLP0DO92 83 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ERGP11308 486 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 TDGF1P13385 188 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 F3P13726 295 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 EGR1P18146 543 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 LBPP18428 481 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 GNAZP19086 355 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 MST1P26927 711 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 NDUFS1P28331 727 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 HNF4AP41235 474 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 CASP2P42575 452 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 KRT6CP48668 564 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 C1orf61Q13536 156 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 DOC2AQ14183 400 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ABRAXAS2Q15018 415 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ZRSR2Q15696 482 aaKnown RBP6.97□□□□□ -1.29
UBE4B-204ENST00000462658 OTOGLQ3ZCN5 2332 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 SGO1Q5FBB7 561 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 XKR7Q5GH72 579 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 TMTC4Q5T4D3 741 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 ABLIM2Q6H8Q1 611 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 FBXO42Q6P3S6 717 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 LCTLQ6UWM7 567 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 RNF165Q6ZSG1 346 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 Q6ZSR9 355 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 LPCAT2Q7L5N7 544 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 SPATA19Q7Z5L4 167 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 TAF8Q7Z7C8 310 aa6.97□□□□□ -1.29
UBE4B-204ENST00000462658 LONP2Q86WA8 852 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms