RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 OR6C3Q9NZP0 311 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 VPS18Q9P253 973 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 COPG2Q9UBF2 871 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 UBA2Q9UBT2 640 aaPredicted RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 CTNNAL1Q9UBT7 734 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 LNPEPQ9UIQ6 1025 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 ERVK-11Q9UQG0 969 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 MED12Q93074 2177 aa4.54□□□□□ -1.68
COPS3-204ENST00000462236 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
COPS3-204ENST00000462236 CUBNO60494 3623 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 IGHV5-51A0A0C4DH38 117 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 A0A0U1RQS6 177 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 A0A1B0GUH1 482 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 FAM237BA0A1B0GVD1 139 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 MYO1GB0I1T2 1018 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 J3KR12 359 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 HCRTR2O43614 444 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 NDUFS3O75489 264 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 JCHAINP01591 159 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 IGKV2-30P06310 120 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 CD1EP15812 388 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 SSTR2P30874 369 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 TSFMP43897 325 aaKnown RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 CAPZBP47756 277 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 TDGF1P3P51864 188 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 GSCP56915 257 aaPredicted RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 SNX16P57768 344 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 RPS15P62841 145 aaKnown RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 POLR2LP62875 67 aaKnown RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 CETN1Q12798 172 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 PRKG2Q13237 762 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 C15orf59Q2T9L4 293 aaPredicted RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 ODF3L2Q3SX64 289 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 TDRD12Q587J7 1177 aaKnown RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 DCAF10Q5QP82 559 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 PLEKHS1Q5SXH7 462 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 ZNF658Q5TYW1 1059 aaPredicted RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 ITPRIPL1Q6GPH6 555 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 RAET1GQ6H3X3 334 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 RWDD4Q6NW29 188 aaKnown RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 DUS1LQ6P1R4 473 aaKnown RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 TRIM65Q6PJ69 517 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 CYP20A1Q6UW02 462 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 LCTLQ6UWM7 567 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 RFLNAQ6ZTI6 216 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 TSPAN33Q86UF1 283 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 NOXA1Q86UR1 476 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 FAM71AQ8IYT1 594 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 DSELQ8IZU8 1212 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 PYROXD2Q8N2H3 581 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 CCDC185Q8N715 623 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 AVL9Q8NBF6 648 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 ZNF501Q96CX3 271 aaPredicted RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 SCRN2Q96FV2 425 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 PERPQ96FX8 193 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 FAM81BQ96LP2 452 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 HARBI1Q96MB7 349 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 GSDMAQ96QA5 445 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 TSG101Q99816 390 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 NCAPGQ9BPX3 1015 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 NLNQ9BYT8 704 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 CXXC4Q9H2H0 198 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 GOLPH3LQ9H4A5 285 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 SUDS3Q9H7L9 328 aaPredicted RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 ZBTB20Q9HC78 741 aaPredicted RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 SIX2Q9NPC8 291 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 CHST11Q9NPF2 352 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 CISD1Q9NZ45 108 aaKnown RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 ZNF624Q9P2J8 865 aaPredicted RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 FBXO9Q9UK97 447 aaPredicted RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 RARRES3Q9UL19 164 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 MKLN1Q9UL63 735 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 ADAM18Q9Y3Q7 739 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 CSAG2Q9Y5P2 127 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 CEPT1Q9Y6K0 416 aa4.53□□□□□ -1.68
COPS3-204ENST00000462236 YLPM1P49750 1951 aaKnown RBP4.53□□□□□ -1.68
COPS3-204ENST00000462236 DSCAMO60469 2012 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 SCN3AQ9NY46 2000 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 A0A1W2PQ67 120 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GTPBP10A4D1E9 387 aaKnown RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 A8MX80 341 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 AKR1B15C9JRZ8 316 aaPredicted RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 CHUKO15111 745 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 KCNN4O15554 427 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 SOCS5O75159 536 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 SLC25A12O75746 678 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 KLF7O75840 302 aaPredicted RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 GAGE7O76087 117 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 MLYCDO95822 493 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GAGE12FP0CL80 117 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GAGE12GP0CL81 117 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GAGE12IP0CL82 117 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 MAOAP21397 527 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 HTR1EP28566 365 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 PSMB10P40306 273 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 GPR1P46091 355 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 DRG2P55039 364 aaKnown RBP4.52□□□□□ -1.69
COPS3-204ENST00000462236 AP1S1P61966 158 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 PPP1CAP62136 330 aa4.52□□□□□ -1.69
COPS3-204ENST00000462236 OTUD4Q01804 1114 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms