RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 NEURL3Q96EH8 262 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 ZBED6CLQ96FA7 236 aaPredicted RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 GON7Q9BXV9 100 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 ERP29P30040 261 aaKnown RBP17.47■□□□□ 0.39
HPS3-204ENST00000462030 CD79BP40259 229 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 KCNJ5P48544 419 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 POM121L1PQ3SYA9 428 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 PODNL1Q6PEZ8 512 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 CNIH2Q6PI25 160 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 PEX5LQ8IYB4 626 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 SLC5A11Q8WWX8 675 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 TIFAQ96CG3 184 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 ZNF354BQ96LW1 612 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 TEFMQ96QE5 360 aaKnown RBP17.47■□□□□ 0.39
HPS3-204ENST00000462030 GPA33Q99795 319 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 B3GAT2Q9NPZ5 323 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 STARD7Q9NQZ5 370 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 MRPL17Q9NRX2 175 aaKnown RBP17.47■□□□□ 0.39
HPS3-204ENST00000462030 GIMAP4Q9NUV9 329 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 TMEM39AQ9NV64 488 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 A4GNTQ9UNA3 340 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 SCN5AQ14524 2016 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 M0R3H8 397 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 SH3BP5O60239 455 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 SLC2A2P11168 524 aaPredicted RBP17.47■□□□□ 0.39
HPS3-204ENST00000462030 CYP2A6P11509 494 aaPredicted RBP17.47■□□□□ 0.39
HPS3-204ENST00000462030 MMP11P24347 488 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 FABP5Q01469 135 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 HSPB3Q12988 150 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 HIST2H2AA3Q6FI13 130 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 QSOX2Q6ZRP7 698 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 SHFQ7M4L6 423 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 OLIG3Q7RTU3 272 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 MEX3DQ86XN8 651 aaKnown RBP17.47■□□□□ 0.39
HPS3-204ENST00000462030 Q8N402 240 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 SNAPC3Q92966 411 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 GLYATL1Q969I3 302 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 CITED4Q96RK1 184 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 ZSCAN5AQ9BUG6 496 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 ZSCAN32Q9NX65 697 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 ACAD8Q9UKU7 415 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 ICKQ9UPZ9 632 aa17.47■□□□□ 0.39
HPS3-204ENST00000462030 SMLR1H3BR10 107 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 QSOX1O00391 747 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 RTCAO00442 366 aaKnown RBP17.46■□□□□ 0.39
HPS3-204ENST00000462030 AKR7A2O43488 359 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 HPGDSO60760 199 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 MYL12AP19105 171 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 GZMKP49863 264 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 P2RX3P56373 397 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 SNRPD2P62316 118 aaKnown RBP17.46■□□□□ 0.39
HPS3-204ENST00000462030 NFE2L1Q14494 772 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 TRIQKQ629K1 86 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 NXPE4Q6UWF7 544 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 ZER1Q7Z7L7 766 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 HMGN2P46Q86SG4 172 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 ADGRF3Q8IZF5 1079 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 FGF11Q92914 225 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 MED18Q9BUE0 208 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 SGPP1Q9BX95 441 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 NLKQ9UBE8 527 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 KLHL21Q9UJP4 597 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 HMGN4O00479 90 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 STK25O00506 426 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 OR12D1P0DN82 309 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 NR2F6P10588 404 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 IL12RB1P42701 662 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 MANFP55145 182 aaKnown RBP17.46■□□□□ 0.39
HPS3-204ENST00000462030 TAP2Q03519 686 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 TLE2Q04725 743 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 ZNF284Q2VY69 593 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 BRAT1Q6PJG6 821 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 C2orf73Q8N5S3 287 aaPredicted RBP17.46■□□□□ 0.39
HPS3-204ENST00000462030 ZNF557Q8N988 423 aaPredicted RBP17.46■□□□□ 0.39
HPS3-204ENST00000462030 C19orf18Q8NEA5 215 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 UPRTQ96BW1 309 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 DCLRE1CQ96SD1 692 aaKnown RBP17.46■□□□□ 0.39
HPS3-204ENST00000462030 LINC00597Q9H2U6 94 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 PPP1R3EQ9H7J1 279 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 SEC14L3Q9UDX4 400 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 FBXW2Q9UKT8 454 aa17.46■□□□□ 0.39
HPS3-204ENST00000462030 SLC30A4O14863 429 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 GRM6O15303 877 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 LEFTY1O75610 366 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 EPHX1P07099 455 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 SOX18P35713 384 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 GIPRP48546 466 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 C3orf38Q5JPI3 329 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 IKBIPQ70UQ0 350 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 C6orf120Q7Z4R8 191 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 IQCHQ86VS3 1027 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 LIX1LQ8IVB5 337 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 CFAP206Q8IYR0 622 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 AP3S1Q92572 193 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 PLA2G12AQ9BZM1 189 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 SERHL2Q9H4I8 314 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 CTPS2Q9NRF8 586 aa17.45■□□□□ 0.38
HPS3-204ENST00000462030 RBFOX1Q9NWB1 397 aaKnown RBP17.45■□□□□ 0.38
HPS3-204ENST00000462030 GPR52Q9Y2T5 361 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms