RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 TC2NQ8N9U0 490 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 NAXEQ8NCW5 288 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 NFAM1Q8NET5 270 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-206ENST00000461574 TNIP2Q8NFZ5 429 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 TMEM158Q8WZ71 300 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 SMPDL3BQ92485 455 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 LPGAT1Q92604 370 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 DAZLQ92904 295 aaKnown RBP4.63□□□□□ -1.67
BRCA1-206ENST00000461574 FAR2Q96K12 515 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 JSRP1Q96MG2 331 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-206ENST00000461574 RUNDC3BQ96NL0 473 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 BIRC8Q96P09 236 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 HAUS8Q9BT25 410 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 AARSD1Q9BTE6 412 aaKnown RBP4.63□□□□□ -1.67
BRCA1-206ENST00000461574 IL22Q9GZX6 179 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 SLC6A15Q9H2J7 730 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 UBTD1Q9HAC8 227 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 PRTFDC1Q9NRG1 225 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 HOMER3Q9NSC5 361 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 TUBA8Q9NY65 449 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-206ENST00000461574 MYOTQ9UBF9 498 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 COPS7AQ9UBW8 275 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 ING1Q9UK53 422 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-206ENST00000461574 TFR2Q9UP52 801 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 CAMK2AQ9UQM7 478 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 MRPS33Q9Y291 106 aaKnown RBP4.63□□□□□ -1.67
BRCA1-206ENST00000461574 MMACHCQ9Y4U1 282 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 CLCA3PQ9Y6N3 262 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 FREM3P0C091 2139 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 DOCK7Q96N67 2140 aa4.63□□□□□ -1.67
BRCA1-206ENST00000461574 KIAA1549Q9HCM3 1950 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 DSCAMO60469 2012 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 A0A088AWK7 358 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 IGKV3D-11A0A0A0MRZ8 115 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 TCRBV5S2A0A599 114 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 TRBC2A0A5B9 178 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 AHRRA9YTQ3 701 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 AP3B1O00203 1094 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 PRKNO60260 465 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 TRAPPC6AO75865 159 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CNOT4O95628 575 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 HIST1H2AGP0C0S8 130 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 MPC1LP0DKB6 136 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CCL3P10147 92 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 TNNI3P19429 210 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 HIST1H2ADP20671 130 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 OGNP20774 298 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 FPR1P21462 350 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 ZNF10P21506 573 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 GDF1P27539 372 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 NMBRP28336 390 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 PPP2R1BP30154 601 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 OPRM1P35372 400 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CPOXP36551 454 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 SKIV2L2P42285 1042 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 SELENOPP49908 381 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 GPR143P51810 404 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 AGFG1P52594 562 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 ZNF136P52737 540 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 ADARP55265 1226 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 BASP1P80723 227 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CCZ1BP86790 482 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CCZ1P86791 482 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 TBL3Q12788 808 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 NAE1Q13564 534 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 RCAN2Q14206 197 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CSHL1Q14406 222 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 ACSF3Q4G176 576 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 XKR6Q5GH73 641 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 TOR1AIP1Q5JTV8 583 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 PRAMEF20Q5VT98 475 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 ZNF470Q6ECI4 717 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 LRRC8EQ6NSJ5 796 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CASC4Q6P4E1 433 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 AGTRAPQ6RW13 159 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 TEPPQ6URK8 271 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CES3Q6UWW8 571 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 PRSS57Q6UWY2 283 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 MBOAT1Q6ZNC8 495 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CLEC17AQ6ZS10 378 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 PIWIL4Q7Z3Z4 852 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CLNKQ7Z7G1 428 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 LUZP2Q86TE4 346 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CNGA4Q8IV77 575 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CPNE9Q8IYJ1 553 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 PM20D2Q8IYS1 436 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 AFAP1L2Q8N4X5 818 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 GPATCH11Q8N954 259 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 FAM47BQ8NA70 645 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 OR5L2Q8NGL0 311 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 GABPB2Q8TAK5 448 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 NEIL3Q8TAT5 605 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 SLC22A8Q8TCC7 542 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 UTP15Q8TED0 518 aaKnown RBP4.62□□□□□ -1.67
BRCA1-206ENST00000461574 ATG4AQ8WYN0 398 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 CCT6BQ92526 530 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 DIO2Q92813 273 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 PPP1R14AQ96A00 147 aa4.62□□□□□ -1.67
BRCA1-206ENST00000461574 SCYL1Q96KG9 808 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms