RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 IGKV3-11P04433 115 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 CPMP14384 443 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 TIA1P31483 386 aaKnown RBP eCLIP14.25□□□□□ -0.13
VARS-219ENST00000461328 CA7P43166 264 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 MEOX1P50221 254 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 GPR85P60893 370 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 SLC48A1Q6P1K1 146 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 SIAH3Q8IW03 269 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 SULF2Q8IWU5 870 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 POGLUT1Q8NBL1 392 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 NUBPLQ8TB37 319 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 SLC22A8Q8TCC7 542 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 TCP10LQ8TDR4 215 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 TM4SF18Q96CE8 201 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 GATA5Q9BWX5 397 aaPredicted RBP14.25□□□□□ -0.13
VARS-219ENST00000461328 BRINP2Q9C0B6 783 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 SENP1Q9P0U3 644 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 RAB21Q9UL25 225 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 PSME2Q9UL46 239 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 ZNF780BQ9Y6R6 833 aa14.25□□□□□ -0.13
VARS-219ENST00000461328 TFECO14948 347 aaPredicted RBP14.24□□□□□ -0.13
VARS-219ENST00000461328 ASNA1O43681 348 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 PEX1O43933 1283 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 CHEK2O96017 543 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 IL3P08700 152 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 UROSP10746 265 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 PORP16435 677 aaPredicted RBP14.24□□□□□ -0.13
VARS-219ENST00000461328 SERPINB3P29508 390 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 ALDH3A1P30838 453 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 SSTR4P31391 388 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 GALNSP34059 522 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 FEN1P39748 380 aaKnown RBP14.24□□□□□ -0.13
VARS-219ENST00000461328 ZNF844Q08AG5 666 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 ZNF750Q32MQ0 723 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 RNFT1Q5M7Z0 435 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 HLA-DQA1Q5Y7H0 255 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 CLEC6AQ6EIG7 209 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 MTFR2Q6P444 385 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 OPN5Q6U736 354 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 MDGA2Q7Z553 956 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 GHDCQ8N2G8 530 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 TRMOQ9BU70 441 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 MECRQ9BV79 373 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 TMEM109Q9BVC6 243 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 CXorf21Q9HAI6 301 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
VARS-219ENST00000461328 GIMAP4Q9NUV9 329 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 UTS2RQ9UKP6 389 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 ENTPD4Q9Y227 616 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 DLGAP4Q9Y2H0 992 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 CROCCQ5TZA2 2017 aa14.24□□□□□ -0.13
VARS-219ENST00000461328 OR6C76A6NM76 312 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 ANXA4P09525 319 aaPredicted RBP14.23□□□□□ -0.13
VARS-219ENST00000461328 ESRRAP11474 423 aaPredicted RBP14.23□□□□□ -0.13
VARS-219ENST00000461328 ABOP16442 354 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 CSNK2A2P19784 350 aaPredicted RBP14.23□□□□□ -0.13
VARS-219ENST00000461328 RFC3P40938 356 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 RAE1P78406 368 aaKnown RBP14.23□□□□□ -0.13
VARS-219ENST00000461328 HEPACAMQ14CZ8 416 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 C3AR1Q16581 482 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 CEP85LQ5SZL2 805 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 RTL4Q6ZR62 310 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 SPPL2CQ8IUH8 684 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 LRRC25Q8N386 305 aaPredicted RBP14.23□□□□□ -0.13
VARS-219ENST00000461328 VWA5B2Q8N398 1253 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 PSD4Q8NDX1 1056 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 C16orf78Q8WTQ4 265 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 EXOSC8Q96B26 276 aaKnown RBP14.23□□□□□ -0.13
VARS-219ENST00000461328 ZBTB9Q96C00 473 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 CCDC120Q96HB5 630 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 WWTR1Q9GZV5 400 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 TNFRSF12AQ9NP84 129 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 TINAGQ9UJW2 476 aa14.23□□□□□ -0.13
VARS-219ENST00000461328 C2orf92A0A1B0GVN3 265 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 SERTM1A2A2V5 107 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 G3V3Y1 287 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 AZIN1O14977 448 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 RSL1D1O76021 490 aaKnown RBP14.22□□□□□ -0.13
VARS-219ENST00000461328 CT62P0C5K7 136 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 DRD2P14416 443 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 CREB1P16220 341 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 PTGER1P34995 402 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 DCTP40126 519 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 SLC37A1P57057 533 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 HSF1Q00613 529 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 PLGLB1Q02325 96 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 ZNF763Q0D2J5 394 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 EBPQ15125 230 aaKnown RBP14.22□□□□□ -0.13
VARS-219ENST00000461328 MPEG1Q2M385 716 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 PIGGQ5H8A4 983 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 ZNF787Q6DD87 383 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 FAM180BQ6P0A1 224 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 ZCCHC23Q6ZST2 131 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 TAGAPQ8N103 731 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 ZFP62Q8NB50 900 aaPredicted RBP14.22□□□□□ -0.13
VARS-219ENST00000461328 PPP1R14CQ8TAE6 165 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 EML4Q9HC35 981 aaKnown RBP14.22□□□□□ -0.13
VARS-219ENST00000461328 HEY2Q9UBP5 337 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 BCAP29Q9UHQ4 241 aa14.22□□□□□ -0.13
VARS-219ENST00000461328 CES1P1Q9UKY3 287 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms