RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 PPIP5K2O43314 1243 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 GRID2O43424 1007 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 LANCL1O43813 399 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CDH16O75309 829 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CSO75390 466 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 CSDE1O75534 798 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 PIGNO95427 931 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 ACSL3O95573 720 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 ECDO95905 644 aaPredicted RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 CLPTM1O96005 669 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 NGFP01138 241 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 IGKV3-20P01619 116 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 AMBPP02760 352 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CRYGCP07315 174 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CD48P09326 243 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 PLA2G4BP0C869 781 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 PABPC4LP0CB38 370 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 ZCCHC18P0CG32 403 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 STAG3L2P0CL84 134 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 SPP1P10451 314 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 HAPLN1P10915 354 aaPredicted RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 POU2F1P14859 743 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 LBPP18428 481 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CD22P20273 847 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 MSR1P21757 451 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 ANOS1P23352 680 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 RRM2P31350 389 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 TIA1P31483 386 aaKnown RBP eCLIP3.02□□□□□ -1.93
VPS8-215ENST00000460158 CEACAM8P31997 349 aaPredicted RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 RPL9P32969 192 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 DLSTP36957 453 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 ETV5P41161 510 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 MNDAP41218 407 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 SLC1A3P43003 542 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 MAGEB1P43366 347 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 LEPRP48357 1165 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 FNTAP49354 379 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CRYBB1P53674 252 aaPredicted RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 MYL6P60660 151 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 POLR2LP62875 67 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 NCBP1Q09161 790 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 TRAP1Q12931 704 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 TNK1Q13470 666 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 DRP2Q13474 957 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CYLC2Q14093 348 aaPredicted RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 MTHFSDQ2M296 383 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 ITPRIPL2Q3MIP1 535 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 FAM72AQ5TYM5 149 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 FAM72DQ6L9T8 149 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 KDM7AQ6ZMT4 941 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 Q6ZTC4 211 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 VPS36Q86VN1 386 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 FAM72BQ86X60 149 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 TMEM126BQ8IUX1 230 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 GRAMD2AQ8IUY3 354 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CCDC60Q8IWA6 550 aaPredicted RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 AQP12AQ8IXF9 295 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 KLHDC8BQ8IXV7 354 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 KATNAL2Q8IYT4 538 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 ASCC1Q8N9N2 400 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 THAP8Q8NA92 274 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 KIAA0895Q8NCT3 520 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 OR9K2Q8NGE7 335 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 PAQR8Q8TEZ7 354 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CCDC107Q8WV48 283 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 LIPHQ8WWY8 451 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 OR1E3Q8WZA6 343 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 TMEM143Q96AN5 459 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 SLCO4A1Q96BD0 722 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 ZNF501Q96CX3 271 aaPredicted RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 NSL1Q96IY1 281 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CYTH2Q99418 400 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 FEVQ99581 238 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 TSG101Q99816 390 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CPNE1Q99829 537 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 BPIFA3Q9BQP9 254 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 SPATA16Q9BXB7 569 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 NUSAP1Q9BXS6 441 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 NMNAT2Q9BZQ4 307 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 ADNPQ9H2P0 1102 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CUEDC2Q9H467 287 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 TDRD3Q9H7E2 651 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 WDR76Q9H967 626 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 COG4Q9H9E3 785 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 MEAF6Q9HAF1 191 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 MAGEF1Q9HAY2 307 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 CYP3A43Q9HB55 503 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 KCNMB3Q9NPA1 279 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 SIX2Q9NPC8 291 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 SLC52A3Q9NQ40 469 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 SDR39U1Q9NRG7 319 aaPredicted RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 YAE1D1Q9NRH1 226 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 GKN1Q9NS71 199 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 VPS54Q9P1Q0 977 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 MBD2Q9UBB5 411 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 PEF1Q9UBV8 284 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 GAB2Q9UQC2 676 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 TCF19Q9Y242 345 aa3.02□□□□□ -1.93
VPS8-215ENST00000460158 MRPS33Q9Y291 106 aaKnown RBP3.02□□□□□ -1.93
VPS8-215ENST00000460158 TMED3Q9Y3Q3 217 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms