RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 OR4D2P58180 307 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 PPP1CAP62136 330 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 PRR5P85299 388 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 DAB2P98082 770 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 CHRNB3Q05901 458 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 HSPB3Q12988 150 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 GAB1Q13480 694 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 SQSTM1Q13501 440 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 GNA13Q14344 377 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 RGNQ15493 299 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 ZNF630Q2M218 657 aaPredicted RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 VMACQ2NL98 169 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 PRTGQ2VWP7 1150 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 FAM214AQ32MH5 1076 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 TBCELQ5QJ74 424 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 FKBP9P1Q75LS8 142 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 GPR155Q7Z3F1 870 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 ZNF605Q86T29 641 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 SPPL2CQ8IUH8 684 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 GPR135Q8IZ08 494 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 DTWD1Q8N5C7 304 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 OR4K14Q8NGD5 310 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 OR56A1Q8NGH5 318 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 PSMA8Q8TAA3 256 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 NUDT8Q8WV74 236 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 FIG4Q92562 907 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 TANKQ92844 425 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 PPWD1Q96BP3 646 aaKnown RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 NEURL3Q96EH8 262 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 MVB12AQ96EY5 273 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 AURKBQ96GD4 344 aaPredicted RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 ZNF285Q96NJ3 590 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 AMDHD1Q96NU7 426 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 MACROD1Q9BQ69 325 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 MAGIXQ9H6Y5 334 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 RPF2Q9H7B2 306 aaKnown RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 CAAP1Q9H8G2 361 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 C8orf4Q9NR00 106 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 SLC6A13Q9NSD5 602 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 CCM2LQ9NUG4 571 aaPredicted RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 OLAHQ9NV23 265 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 SEMA5BQ9P283 1151 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 NKX1-2Q9UD57 310 aaPredicted RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 FAF1Q9UNN5 650 aaPredicted RBP8.43□□□□□ -1.06
VPS50-207ENST00000458530 ANGPT4Q9Y264 503 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 ZNF451Q9Y4E5 1061 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 ATG4BQ9Y4P1 393 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 SNX8Q9Y5X2 465 aa8.43□□□□□ -1.06
VPS50-207ENST00000458530 SCN2AQ99250 2005 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 FITM1A5D6W6 292 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 SYNDIG1LA6NDD5 238 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 MYO1GB0I1T2 1018 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 C4orf51C9J302 202 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 J3QKU1 62 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 CASQ2O14958 399 aaPredicted RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 TLX3O43711 291 aaPredicted RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 CREG1O75629 220 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 PDE9AO76083 593 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 NSA2O95478 260 aaKnown RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 CPNE6O95741 557 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 NTRK1P04629 796 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 FHP07954 510 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 ANKRD34CP0C6C1 535 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 GIMD1P0DJR0 217 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 RAP2AP10114 183 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 RNH1P13489 461 aaKnown RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 EFNA1P20827 205 aaPredicted RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 FASP25445 335 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 CRATP43155 626 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 KHKP50053 298 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 ERFP50548 548 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 ARSFP54793 590 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 TP53BP2Q13625 1128 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 ELOAQ14241 798 aaKnown RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 TRIP10Q15642 601 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 CEBPEQ15744 281 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 DEFB110Q30KQ9 67 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 AMZ1Q400G9 498 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 SAXO2Q658L1 398 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 TMEM71Q6P5X7 295 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 TLDC1Q6P9B6 456 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 GATAD2AQ86YP4 633 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 LRRC25Q8N386 305 aaPredicted RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 D2HGDHQ8N465 521 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 METTL25Q8N6Q8 603 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 Q8N9G6 341 aaPredicted RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 SLC35G5Q96KT7 338 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 MAPKAP1Q9BPZ7 522 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 ASPSCR1Q9BZE9 553 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 TRIM8Q9BZR9 551 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 ZNF768Q9H5H4 540 aaKnown RBP8.42□□□□□ -1.06
VPS50-207ENST00000458530 IKZF5Q9H5V7 419 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 PIF1Q9H611 641 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 TMEM38AQ9H6F2 299 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 FAM60AQ9NP50 221 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 ENAMQ9NRM1 1142 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 ADPRHL2Q9NX46 363 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 KLHL3Q9UH77 587 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 CDC14AQ9UNH5 594 aa8.42□□□□□ -1.06
VPS50-207ENST00000458530 SRPK3Q9UPE1 567 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms