RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ISLR2Q6UXK2 745 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 IKBIPQ70UQ0 350 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 MAVSQ7Z434 540 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 TICAM1Q8IUC6 712 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 CRLF3Q8IUI8 442 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 CCDC116Q8IYX3 515 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 LRRC34Q8IZ02 419 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 ARMC10Q8N2F6 343 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 SIRT6Q8N6T7 355 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 FNDC5Q8NAU1 212 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 OR1N1Q8NGS0 311 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 OR14A16Q8NHC5 309 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 SLC2A12Q8TD20 617 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 DOK4Q8TEW6 326 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 DYDC1Q8WWB3 177 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 RIT1Q92963 219 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 NCLNQ969V3 563 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 VMP1Q96GC9 406 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 MAELQ96JY0 434 aaKnown RBP9.36□□□□□ -0.91
ATG4A-206ENST00000457035 TSSK3Q96PN8 268 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 PELOQ9BRX2 385 aaKnown RBP9.36□□□□□ -0.91
ATG4A-206ENST00000457035 C1orf50Q9BV19 199 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 TRIM4Q9C037 500 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 CLMPQ9H6B4 373 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 CXorf21Q9HAI6 301 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 KCNK13Q9HB14 408 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 SLC35C2Q9NQQ7 365 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 PTGFRNQ9P2B2 879 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 MARCOQ9UEW3 520 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF451Q9Y4E5 1061 aa9.36□□□□□ -0.91
ATG4A-206ENST00000457035 HEMK1Q9Y5R4 338 aaPredicted RBP9.36□□□□□ -0.91
ATG4A-206ENST00000457035 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 DNAJC13O75165 2243 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 TMEM200CA6NKL6 621 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 TRPC5OSA6NMA1 111 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 GABRR3A8MPY1 467 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 A8MUI8 341 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 MYO1GB0I1T2 1018 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 PRKNO60260 465 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 OR10H2O60403 315 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 MAN1A2O60476 641 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 VPS4BO75351 444 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 CLPSP04118 112 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ATP1B1P05026 303 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 CT62P0C5K7 136 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 G6PDP11413 515 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 PRPS2P11908 318 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 COX7A2P14406 83 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 LBPP18428 481 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 MAPK1P28482 360 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 EPHA3P29320 983 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ASMTP46597 345 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 PGDP52209 483 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ERVK-8P63133 956 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 FUT7Q11130 342 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 MAP4K2Q12851 820 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 PDE7AQ13946 482 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF267Q14586 743 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 SPRED3Q2MJR0 410 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 PRICKLE4Q2TBC4 344 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 LACTB2Q53H82 288 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 IRAK1BP1Q5VVH5 260 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 OGFOD2Q6N063 350 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ASB18Q6ZVZ8 466 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 RPS19BP1Q86WX3 136 aaKnown RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 LIX1Q8N485 282 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ARFGAP2Q8N6H7 521 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 RBMXL3Q8N7X1 1067 aaKnown RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 CLHC1Q8NHS4 586 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 CDC26Q8NHZ8 85 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 SUN3Q8TAQ9 357 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 NUDT8Q8WV74 236 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 HAS2Q92819 552 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 GFM2Q969S9 779 aaKnown RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 EXOSC8Q96B26 276 aaKnown RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 CTHRC1Q96CG8 243 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 KLHL29Q96CT2 875 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF764Q96H86 408 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 DEFB126Q9BYW3 111 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 OR8D2Q9GZM6 311 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 CDCP1Q9H5V8 836 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 REEP4Q9H6H4 257 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 WDR55Q9H6Y2 383 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ASIC5Q9NY37 505 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 STMN3Q9NZ72 180 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF639Q9UID6 485 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF780BQ9Y6R6 833 aa9.35□□□□□ -0.91
ATG4A-206ENST00000457035 ASH1LQ9NR48 2969 aaKnown RBP9.35□□□□□ -0.91
ATG4A-206ENST00000457035 MYO18BQ8IUG5 2567 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 TRBV11-1A0A0K0K1C0 115 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 AKAP10O43572 662 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ZFAND5O76080 213 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 LRATO95237 230 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 TGDSO95455 350 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ALPPP05187 535 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 CD97P48960 835 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 DIO3P55073 304 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 CLDN8P56748 225 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 SLC37A1P57057 533 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms