RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 APOBEC4Q8WW27 367 aaKnown RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 SORCS2Q96PQ0 1159 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 KCNN2Q9H2S1 579 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 FOLH1BQ9HBA9 442 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 ZSCAN32Q9NX65 697 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 LOC105369274A0A096LPK9 316 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 A0A1B0GVM2 712 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 CD8B2A6NJW9 211 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 HOXD4P09016 255 aaPredicted RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 CD8BP10966 210 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 CORO1AP31146 461 aaKnown RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 GABRA5P31644 462 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 SPAM1P38567 509 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 SRP9P49458 86 aaKnown RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 MAP2K6P52564 334 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 RPS13P62277 151 aaKnown RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 DUSP4Q13115 394 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 TPBGQ13641 420 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 KCNC3Q14003 757 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 ELOAQ14241 798 aaKnown RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 SUZ12Q15022 739 aaKnown RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 CCL14Q16627 93 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 RAET1GQ6H3X3 334 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 IL20RBQ6UXL0 311 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 THOC6Q86W42 341 aaKnown RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 OR4N4Q8N0Y3 316 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 MMP21Q8N119 569 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 OXR1Q8N573 874 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 PLA2G15Q8NCC3 412 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 ZBTB44Q8NCP5 570 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 GPR32P1Q8NGA4 272 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 OR4D11Q8NGI4 311 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 NEIL3Q8TAT5 605 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 UFD1Q92890 307 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 RIT1Q92963 219 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 UROC1Q96N76 676 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 RBP7Q96R05 134 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 OR4K3Q96R72 315 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 RNF32Q9H0A6 362 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 ABCG5Q9H222 651 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 GHITMQ9H3K2 345 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 RANBP3Q9H6Z4 567 aaPredicted RBP9.78□□□□□ -0.84
CLIP4-208ENST00000456385 EXTL2Q9UBQ6 330 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
CLIP4-208ENST00000456385 SLC9A3R1O14745 358 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 VNN2O95498 520 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 IFNA14P01570 189 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 C8GP07360 202 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 PCSK2P16519 638 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 STOMP27105 288 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 BTCP35070 178 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ATP5C1P36542 298 aaKnown RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 CSNK1DP48730 415 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 BTN1A1Q13410 526 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ADAM15Q13444 863 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 PIN1Q13526 163 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 GINS1Q14691 196 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ZMYND11Q15326 602 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ZNF630Q2M218 657 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 CCSMST1Q4G0I0 132 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 METAP1DQ6UB28 335 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 RSPO2Q6UXX9 243 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 LIPIQ6XZB0 460 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 TPGS1Q6ZTW0 290 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 TECPR1Q7Z6L1 1165 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 PLEKHH3Q7Z736 793 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ADGRD2Q7Z7M1 963 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 NR2C2APQ86WQ0 139 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 MARCH9Q86YJ5 346 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 FAM26EQ8N5C1 309 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 OR7G3Q8NG95 312 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 GOT1L1Q8NHS2 421 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 HSD17B8Q92506 261 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 RNFT2Q96EX2 444 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 GPA33Q99795 319 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 PRR14Q9BWN1 585 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 MRPL9Q9BYD2 267 aaKnown RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 BHLHE41Q9C0J9 482 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 KCMF1Q9P0J7 381 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 RNF181Q9P0P0 153 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 MGAT4BQ9UQ53 548 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 NPIPB15A6NHN6 443 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 GFYI3L273 518 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 BET1O15155 118 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 TOXO94900 526 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 BCHEP06276 602 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 LIMS3P0CW19 117 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 LIMS4P0CW20 117 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 RRASP10301 218 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 ARAFP10398 606 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 PRKACAP17612 351 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 CELP19835 753 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 FGF9P31371 208 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 TIA1P31483 386 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLIP4-208ENST00000456385 THPOP40225 353 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 BTG1P62324 171 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 NAE1Q13564 534 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 GPR33Q49SQ1 333 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 CLLU1Q5K131 121 aa9.77□□□□□ -0.85
CLIP4-208ENST00000456385 LYPLAL1Q5VWZ2 237 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms