RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 C3orf14Q9HBI5 128 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 BARX1Q9HBU1 254 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 CUEDC1Q9NWM3 386 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 FKBPLQ9UIM3 349 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 MGAT4BQ9UQ53 548 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC9A8Q9Y2E8 581 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 PLEKHM1Q9Y4G2 1056 aa4.31□□□□□ -1.72
DEPDC1-202ENST00000456315 SETD2Q9BYW2 2564 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.3□□□□□ -1.724e-8■■■■■ 30.4
DEPDC1-202ENST00000456315 TMEM272A0A1B0GTI8 110 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ANKRD61A6NGH8 418 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MYL12BO14950 172 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PRKYO43930 277 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 GALR3O60755 368 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 FGF18O76093 207 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SCG5P05408 212 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TPOP07202 933 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ST6GAL1P15907 406 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MYL12AP19105 171 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CD72P21854 359 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TPMTP51580 245 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CDH12P55289 794 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 STXBP1P61764 594 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ELP6Q0PNE2 266 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 KLHL22Q53GT1 634 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 DCAF12L2Q5VW00 463 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF425Q6IV72 752 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TRMT11Q7Z4G4 463 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CCDC117Q8IWD4 279 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PUSL1Q8N0Z8 303 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TMEM132CQ8N3T6 1108 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TCEANCQ8N8B7 351 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 HUS1BQ8NHY5 278 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MYLIPQ8WY64 445 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 APOLD1Q96LR9 279 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 C12orf66Q96MD2 445 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MTERF1Q99551 399 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MAP3K3Q99759 626 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 P2RY13Q9BPV8 354 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MFSD1Q9H3U5 465 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SDHAF2Q9NX18 166 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MAP3K20Q9NYL2 800 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 C2CD3Q4AC94 2353 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SUPT3HB4E1H0 165 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 IFRD1O00458 451 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 VPS26AO75436 327 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PDE9AO76083 593 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 APOA1P02647 267 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 WNT1P04628 370 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TYMPP19971 482 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 WSCD2Q2TBF2 565 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TRIM46Q7Z4K8 759 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 COMMD7Q86VX2 200 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 LINGO1Q96FE5 620 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ZC3HAV1LQ96H79 300 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PKP4Q99569 1192 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 HCAR1Q9BXC0 346 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MRPL40Q9NQ50 206 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 C1GALT1Q9NS00 363 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MAN2C1Q9NTJ4 1040 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 OR6C2Q9NZP2 312 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 LIPT1Q9Y234 373 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TMEM5Q9Y2B1 443 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 APC2O95996 2303 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 BDP1A6H8Y1 2624 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CCDC182A6NF36 153 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 FAM183AA6NL82 134 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 H0YCG3 227 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 IRAK2O43187 625 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ACTL6AO96019 429 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 IL9P15248 144 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 IL1RNP18510 177 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 GIFP27352 417 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 DNAJA1P31689 397 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 GPR15P49685 360 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ARFIP1P53367 373 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 METTL7BQ6UX53 244 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 KRT73Q86Y46 540 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 C17orf47Q8NEP4 570 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 WDR20Q8TBZ3 569 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 NCLNQ969V3 563 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TBC1D20Q96BZ9 403 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PGAP3Q96FM1 320 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PKMYT1Q99640 499 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CCDC32Q9BV29 185 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC22A11Q9NSA0 550 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MRPL15Q9P015 296 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 AAR2Q9Y312 384 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 SSC5DA1L4H1 1573 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 PKDREJQ9NTG1 2253 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 CEP295Q9C0D2 2601 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 ZC3H12DA2A288 527 aaKnown RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 MMP20O60882 483 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 APOC3P02656 99 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 KLKB1P03952 638 aa4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 KLK3P07288 261 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-202ENST00000456315 TSPAN19P0C672 248 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms