RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 LIM2P55344 173 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ARL4CP56559 192 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 RAB38P57729 211 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 STXBP1P61764 594 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 GNG11P61952 73 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 PPIAP62937 165 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SKP1P63208 163 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 MGAT5Q09328 741 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 PMPCAQ10713 525 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 BMPR2Q13873 1038 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 DOC2AQ14183 400 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TGFBIQ15582 683 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 OR4D1Q15615 310 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TRADDQ15628 312 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CMPK2Q5EBM0 449 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 EMC4Q5J8M3 183 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 MTFR2Q6P444 385 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 RPTNQ6XPR3 784 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 C3orf62Q6ZUJ4 267 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 FRA10AC1Q70Z53 315 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 GDF7Q7Z4P5 450 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 GPSM1Q86YR5 675 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CCDC71Q8IV32 467 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ZBED8Q8IZ13 594 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 LGI4Q8N135 537 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 RNF175Q8N4F7 328 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 NKAPQ8N5F7 415 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SNX31Q8N9S9 440 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 OR5M9Q8NGP3 310 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CA5BP1Q8WTZ4 195 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 PYROXD1Q8WU10 500 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 PTPMT1Q8WUK0 201 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 EXT2Q93063 718 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 UCN3Q969E3 161 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 PPWD1Q96BP3 646 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 VPS39Q96JC1 886 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 QRFPRQ96P65 431 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 DMRTA2Q96SC8 542 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CSF3RQ99062 836 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 KRT12Q99456 494 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 MAPKAP1Q9BPZ7 522 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TMEM79Q9BSE2 394 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SORBS1Q9BX66 1292 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ALOXE3Q9BYJ1 711 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 REXO4Q9GZR2 422 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 TRIM45Q9H8W5 580 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ZFP64Q9NPA5 681 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SAYSD1Q9NPB0 183 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 SEMA4BQ9NPR2 832 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 WWOXQ9NZC7 414 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 CD274Q9NZQ7 290 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ASH2LQ9UBL3 628 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ERVK-11Q9UQG0 969 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 ATP23Q9Y6H3 246 aa4.35□□□□□ -1.71
GTF3C3-208ENST00000455546 MED12LQ86YW9 2145 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CENPEQ02224 2701 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CSMD1Q96PZ7 3565 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ATP6AP2A0A1C7CYW4 349 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 TCRBV5S2A0A599 114 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM90A27PA6NNH2 459 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 A8MVJ9 347 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 C17orf105B2RV13 164 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 E7ESA3 106 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 E9PLN8 166 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 HRKO00198 91 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CTNSO60931 367 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PRKRAO75569 313 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 STK16O75716 305 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ATP6AP2O75787 350 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ZFAND5O76080 213 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PRKD3O94806 890 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ETHE1O95571 254 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PCNAP12004 261 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CD1DP15813 335 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 EPORP19235 508 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 AGAP20933 346 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PTX3P26022 381 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SOX3P41225 446 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 MSH2P43246 934 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 DNASE1L1P49184 302 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 HNMTP50135 292 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SSR4P51571 173 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SLC12A2P55011 1212 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 MTTPP55157 894 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 HSD17B7P56937 341 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 GPX6P59796 221 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PRR5P85299 388 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CDKL1Q00532 357 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PLGLB1Q02325 96 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 TLE4Q04727 773 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 STX4Q12846 297 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 DLG1Q12959 904 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CHIT1Q13231 466 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SNTB1Q13884 538 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 FRG1Q14331 258 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 KCNMB1Q16558 191 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 GXYLT1Q4G148 440 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SULT1C3Q6IMI6 304 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 NIPAL1Q6NVV3 410 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF585AQ6P3V2 769 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms