RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 C5orf34Q96MH7 638 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 LRTM1Q9HBL6 345 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 OLAHQ9NV23 265 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 C1orf109Q9NX04 203 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 LRFN1Q9P244 771 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 ADAM29Q9UKF5 820 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 PPIEQ9UNP9 301 aaKnown RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 ATG4BQ9Y4P1 393 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 CLDN16Q9Y5I7 305 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 SHANK1Q9Y566 2161 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 SPENQ96T58 3664 aaKnown RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 A0A0A6YYD5 115 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 TGFBR3LH3BV60 316 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 SEC22BO75396 215 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 EEDO75530 441 aaKnown RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 ZFAND5O76080 213 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 CRYABP02511 175 aaKnown RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 GBAP04062 536 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 CD96P40200 585 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 UQCRFS1P47985 274 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 HNRNPH2P55795 449 aaKnown RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 GABPB1Q06547 395 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 RFTN2Q52LD8 501 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 CCNYL2Q5T2Q4 361 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 TMEM198Q66K66 360 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 C18orf63Q68DL7 685 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 FAM26EQ8N5C1 309 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 ANKS4BQ8N8V4 417 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 TMEM178AQ8NBL3 297 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 THAP3Q8WTV1 239 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 TMEM125Q96AQ2 219 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 APIPQ96GX9 242 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 PELOQ9BRX2 385 aaKnown RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 ZNF717Q9BY31 904 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 MRPL1Q9BYD6 325 aaKnown RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 OR8D2Q9GZM6 311 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 PCDHGB6Q9Y5F9 930 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 MYOCOSA0A1B0GUC4 107 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 ANKUB1A6NFN9 424 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 FGF17O60258 216 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 KLK1P06870 262 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 MLF1P58340 268 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 RPL38P63173 70 aaKnown RBP16.52■□□□□ 0.24
COPS7A-202ENST00000455113 ID2Q02363 134 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 FOLH1Q04609 750 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 TBL3Q12788 808 aaKnown RBP16.52■□□□□ 0.24
COPS7A-202ENST00000455113 KIAA0040Q15053 153 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 OGFOD2Q6N063 350 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 HSDL2Q6YN16 418 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 OR4N5Q8IXE1 308 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 TMEM156Q8N614 296 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 FNDC5Q8NAU1 212 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 PRR7Q8TB68 274 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 ANKRD9Q96BM1 317 aaPredicted RBP16.52■□□□□ 0.24
COPS7A-202ENST00000455113 ART5Q96L15 291 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.52■□□□□ 0.24
COPS7A-202ENST00000455113 ASB4Q9Y574 426 aa16.52■□□□□ 0.24
COPS7A-202ENST00000455113 RP1L1Q8IWN7 2480 aaPredicted RBP16.52■□□□□ 0.23
COPS7A-202ENST00000455113 ESPL1Q14674 2120 aa16.52■□□□□ 0.23
COPS7A-202ENST00000455113 UBDO15205 165 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 TMPRSS11DO60235 418 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 OR10H2O60403 315 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 TPP2P29144 1249 aaPredicted RBP16.51■□□□□ 0.23
COPS7A-202ENST00000455113 STT3AP46977 705 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 MAPK12P53778 367 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 ERVK-8P63133 956 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 ACSM2AQ08AH3 577 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 MRPL49Q13405 166 aaKnown RBP16.51■□□□□ 0.23
COPS7A-202ENST00000455113 METTL21CQ5VZV1 264 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 ACSM2BQ68CK6 577 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 SPINK14Q6IE38 97 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 MRM1Q6IN84 353 aaKnown RBP16.51■□□□□ 0.23
COPS7A-202ENST00000455113 METTL4Q8N3J2 472 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 PTPMT1Q8WUK0 201 aaPredicted RBP16.51■□□□□ 0.23
COPS7A-202ENST00000455113 BARD1Q99728 777 aaKnown RBP16.51■□□□□ 0.23
COPS7A-202ENST00000455113 NPAS2Q99743 824 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 C1orf50Q9BV19 199 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 TRIM33Q9UPN9 1127 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 NTNG1Q9Y2I2 539 aa16.51■□□□□ 0.23
COPS7A-202ENST00000455113 MAN1A2O60476 641 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 ITGA10O75578 1167 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 CBX6O95503 412 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 ALDOCP09972 364 aaKnown RBP16.5■□□□□ 0.23
COPS7A-202ENST00000455113 EDN3P14138 238 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 NCF2P19878 526 aaPredicted RBP16.5■□□□□ 0.23
COPS7A-202ENST00000455113 PIK3R1P27986 724 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 EMX2Q04743 252 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 UBAP2LQ14157 1087 aaKnown RBP16.5■□□□□ 0.23
COPS7A-202ENST00000455113 SMU1Q2TAY7 513 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 SPIN4Q56A73 249 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 OR52E8Q6IFG1 317 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 SPATA19Q7Z5L4 167 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 MTDHQ86UE4 582 aaKnown RBP16.5■□□□□ 0.23
COPS7A-202ENST00000455113 ST13P4Q8IZP2 240 aaPredicted RBP16.5■□□□□ 0.23
COPS7A-202ENST00000455113 C1orf52Q8N6N3 182 aaKnown RBP16.5■□□□□ 0.23
COPS7A-202ENST00000455113 ST6GALNAC3Q8NDV1 305 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 OR5L2Q8NGL0 311 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 DNAJB8Q8NHS0 232 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 SLC2A12Q8TD20 617 aa16.5■□□□□ 0.23
COPS7A-202ENST00000455113 CHTF18Q8WVB6 975 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms