RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TAAR6Q96RI8 345 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 RASL10BQ96S79 203 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 CNPPD1Q9BV87 410 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.14□□□□□ -0.317e-7■■□□□ 11.9
HDAC4-205ENST00000454542 ZNF395Q9H8N7 513 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-205ENST00000454542 TAS2R7Q9NYW3 318 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 UTS2RQ9UKP6 389 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-205ENST00000454542 YARS2Q9Y2Z4 477 aaKnown RBP13.14□□□□□ -0.31
HDAC4-205ENST00000454542 RAP2CQ9Y3L5 183 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 EXPH5Q8NEV8 1989 aa13.14□□□□□ -0.31
HDAC4-205ENST00000454542 ASPDHA6ND91 283 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 NME2P1O60361 137 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF354AO60765 605 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 TBX19O60806 448 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 SNNO75324 88 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ERAL1O75616 437 aaKnown RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 HSPA4LO95757 839 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 JUNP05412 331 aaKnown RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 LINC00032P0C843 101 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 NME2P22392 152 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 SSTR4P31391 388 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 SLC1A6P48664 564 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 CYB561P49447 251 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 SSR4P51571 173 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 BST1Q10588 318 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 MAP4K2Q12851 820 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 DUSP8Q13202 625 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 PDE7AQ13946 482 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF267Q14586 743 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 PRSS53Q2L4Q9 553 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 RFTN2Q52LD8 501 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF628Q5EBL2 1059 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 LYPD8Q6UX82 237 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 C16orf47Q6ZP98 133 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 DDIASQ8IXT1 998 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 SAMD14Q8IZD0 417 aaPredicted RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 KIRREL3Q8IZU9 778 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 VWA5B2Q8N398 1253 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 CISD2Q8N5K1 135 aaKnown RBP13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ANKRD42Q8N9B4 389 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 OR7G1Q8NGA0 311 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 OR5L2Q8NGL0 311 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 PPP1R14CQ8TAE6 165 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 RAB3IL1Q8TBN0 382 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 AGR3Q8TD06 166 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 C19orf60Q96EN9 201 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ATP6V1G3Q96LB4 118 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 C3orf30Q96M34 536 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 SLX1AQ9BQ83 275 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 HES7Q9BYE0 225 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 WWTR1Q9GZV5 400 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 SLC35C2Q9NQQ7 365 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ASF1BQ9NVP2 202 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 ANKRD10Q9NXR5 420 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 LRFN1Q9P244 771 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 PSME2Q9UL46 239 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 TENM4Q6N022 2769 aa13.13□□□□□ -0.31
HDAC4-205ENST00000454542 MYO1GB0I1T2 1018 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 PYCARD-AS1I3L0S3 204 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 SEC22BO75396 215 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 SKAP2O75563 359 aaPredicted RBP13.12□□□□□ -0.31
HDAC4-205ENST00000454542 SLC25A12O75746 678 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 OR2J2O76002 312 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 CBX7O95931 251 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 IFI6P09912 130 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 NT5EP21589 574 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 FEN1P39748 380 aaKnown RBP13.12□□□□□ -0.31
HDAC4-205ENST00000454542 ST13P50502 369 aaKnown RBP13.12□□□□□ -0.31
HDAC4-205ENST00000454542 TDGF1P3P51864 188 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 IGFBP7Q16270 282 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 HHATQ5VTY9 493 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 SPINK14Q6IE38 97 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 FAM180BQ6P0A1 224 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 HDXQ7Z353 690 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 CYP4Z2PQ8N1L4 340 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 HORMAD2Q8N7B1 307 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 C17orf47Q8NEP4 570 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 GRHL3Q8TE85 626 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 EXOSC8Q96B26 276 aaKnown RBP13.12□□□□□ -0.31
HDAC4-205ENST00000454542 ERP27Q96DN0 273 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 EGLN2Q96KS0 407 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 PPP3R2Q96LZ3 170 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 ASIC5Q9NY37 505 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 ENTPD4Q9Y227 616 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 COPG1Q9Y678 874 aaKnown RBP13.12□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF780BQ9Y6R6 833 aa13.12□□□□□ -0.31
HDAC4-205ENST00000454542 WWP2O00308 870 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 SASH3O75995 380 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 SLITRK5O94991 958 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 OR6B1O95007 311 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 SP1P08047 785 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 CD46P15529 392 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 SOX3P41225 446 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 OC90Q02509 493 aaPredicted RBP13.11□□□□□ -0.31
HDAC4-205ENST00000454542 C2orf80Q0P641 193 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 STX3Q13277 289 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms