RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 DUSP8Q13202 625 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 HIST2H2ACQ16777 129 aaPredicted RBP10.71□□□□□ -0.69
HERC3-207ENST00000452979 ACSF3Q4G176 576 aaPredicted RBP10.71□□□□□ -0.69
HERC3-207ENST00000452979 PAGE2BQ5JRK9 111 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 GRTP1Q5TC63 336 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 HIST2H2AA3Q6FI13 130 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 SULT1C3Q6IMI6 304 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 DGAT2L6Q6ZPD8 337 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 OR10G3Q8NGC4 313 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 ZNF473Q8WTR7 871 aaKnown RBP10.71□□□□□ -0.69
HERC3-207ENST00000452979 MZB1Q8WU39 189 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 RBM18Q96H35 190 aaKnown RBP10.71□□□□□ -0.69
HERC3-207ENST00000452979 FBXL20Q96IG2 436 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 C18orf12Q96KH6 178 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 ART5Q96L15 291 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 DGAT2Q96PD7 388 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 ZIM3Q96PE6 472 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 GPR22Q99680 433 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 PRDM14Q9GZV8 571 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 SLC6A15Q9H2J7 730 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 CAB39LQ9H9S4 337 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.71□□□□□ -0.69
HERC3-207ENST00000452979 ZNF446Q9NWS9 450 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 JKAMPQ9P055 326 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 TXNDC16Q9P2K2 825 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 ZNF180Q9UJW8 692 aa10.71□□□□□ -0.69
HERC3-207ENST00000452979 TUBAL3A6NHL2 446 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 NCF1BA6NI72 391 aaPredicted RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 NCF1CA8MVU1 366 aaPredicted RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 KDM4EB2RXH2 506 aaPredicted RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 RTCAO00442 366 aaKnown RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 DYRK3O43781 588 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 SASH3O75995 380 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 HPNP05981 417 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 NCF1P14598 390 aaPredicted RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 CPN2P22792 545 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 TACR1P25103 407 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 GMPRP36959 345 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 MSH2P43246 934 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 HSPA7P48741 367 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 ZNF136P52737 540 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 SORDQ00796 357 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 PCDH1Q08174 1060 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 ILF2Q12905 390 aaKnown RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 SF3B4Q15427 424 aaKnown RBP eCLIP10.7□□□□□ -0.75e-6■■■■□ 26.7
HERC3-207ENST00000452979 ZKSCAN8Q15776 578 aaPredicted RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 NTRK2Q16620 822 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 PDK4Q16654 411 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 AP5B1Q2VPB7 878 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 NHSL2Q5HYW2 709 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 TBCELQ5QJ74 424 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 MROH9Q5TGP6 573 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 PRAMEF20Q5VT98 475 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 VASNQ6EMK4 673 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 CHSY3Q70JA7 882 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 KIF18BQ86Y91 864 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 TDRPQ86YL5 185 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 GPSM1Q86YR5 675 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 OR4N5Q8IXE1 308 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 LAS2Q8IYD9 372 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 PM20D2Q8IYS1 436 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 LIX1Q8N485 282 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 PDPRQ8NCN5 879 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 WFDC11Q8NEX6 87 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 TANKQ92844 425 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 PPWD1Q96BP3 646 aaKnown RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 RPF2Q9H7B2 306 aaKnown RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 MS4A12Q9NXJ0 267 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 WWOXQ9NZC7 414 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 PSMC3IPQ9P2W1 217 aaPredicted RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 PTBP2Q9UKA9 531 aaKnown RBP10.7□□□□□ -0.7
HERC3-207ENST00000452979 MPDZO75970 2070 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 KIAA1549Q9HCM3 1950 aa10.7□□□□□ -0.7
HERC3-207ENST00000452979 C15orf38-AP3S2A0A0A6YYH1 394 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 CD8B2A6NJW9 211 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 OR6C76A6NM76 312 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 PHGDHO43175 533 aaKnown RBP10.69□□□□□ -0.7
HERC3-207ENST00000452979 IL18BPO95998 194 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 IL2RAP01589 272 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 ALDOAP04075 364 aaKnown RBP10.69□□□□□ -0.7
HERC3-207ENST00000452979 CD1DP15813 335 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 SERPINB1P30740 379 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 GALNSP34059 522 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 SPRP35270 261 aaPredicted RBP10.69□□□□□ -0.7
HERC3-207ENST00000452979 MAGEA12P43365 314 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 TRPC1P48995 793 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 WNT3P56703 355 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 SLC37A1P57057 533 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 POU4F1Q01851 419 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 IFFO1Q0D2I5 559 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 CHIT1Q13231 466 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 SLAMF1Q13291 335 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 KEAP1Q14145 624 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 RASA2Q15283 850 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 SPRED3Q2MJR0 410 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 DEPDC1Q5TB30 811 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 KHDRBS2Q5VWX1 349 aaKnown RBP10.69□□□□□ -0.7
HERC3-207ENST00000452979 NSUN5P2Q63ZY6 315 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 OR4C11Q6IEV9 310 aa10.69□□□□□ -0.7
HERC3-207ENST00000452979 LRIG3Q6UXM1 1119 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms