RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MAD2L1Q13257 205 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 STX3Q13277 289 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 MSLNQ13421 630 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM132DQ14C87 1099 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ETFDHQ16134 617 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 UAP1Q16222 522 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 KYAT1Q16773 422 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 LSM12Q3MHD2 195 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 TTMPQ5BVD1 217 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 TEDDM1Q5T9Z0 273 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 EEF1A1P5Q5VTE0 462 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SUSD4Q5VX71 490 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF770Q6IQ21 691 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 CAPN13Q6MZZ7 669 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 METTL2BQ6P1Q9 378 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 KIRREL2Q6UWL6 708 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMIGD1Q6UXZ0 262 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 NCCRP1Q6ZVX7 275 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 PAGE2Q7Z2X7 111 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 DPY19L4Q7Z388 723 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 POLNQ7Z5Q5 900 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SCD5Q86SK9 330 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SERPINA9Q86WD7 417 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 DCUN1D3Q8IWE4 304 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ADHFE1Q8IWW8 467 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC38A6Q8IZM9 456 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 LSMEM2Q8N112 164 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 C17orf78Q8N4C9 275 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SPATA6LQ8N4H0 392 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ALLCQ8N6M5 410 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 EMC1Q8N766 993 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 GATSQ8NAP1 163 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SCCPDHQ8NBX0 429 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 B3GALNT2Q8NCR0 500 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR5M8Q8NGP6 311 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ENKURQ8TC29 256 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SUSD6Q92537 303 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 NRGNQ92686 78 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SNAPC3Q92966 411 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 OTULINQ96BN8 352 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 PTCD3Q96EY7 689 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF274Q96GC6 653 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 METTL2AQ96IZ6 378 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 PLEKHA8Q96JA3 519 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZFYVE19Q96K21 471 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 LMLNQ96KR4 655 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 CXorf58Q96LI9 332 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 TGM7Q96PF1 710 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 TESK2Q96S53 571 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 MMS19Q96T76 1030 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 GFI1Q99684 422 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 LRRC1Q9BTT6 524 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 GANQ9H2C0 597 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 LRMDAQ9H2I8 198 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 FOXP1Q9H334 677 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLA2Q9H6Q3 261 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 NARFLQ9H6Q4 476 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 DHX33Q9H6R0 707 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 Q9N2K0 584 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 MYOZ2Q9NPC6 264 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 POLE4Q9NR33 117 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC2A4RGQ9NR83 387 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 GSN-AS1Q9NRJ2 163 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ECHDC1Q9NTX5 307 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 IL37Q9NZH6 218 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 KLHL13Q9P2N7 655 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF229Q9UJW7 825 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ABCG2Q9UNQ0 655 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 CSDC2Q9Y534 153 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 PCDHGB1Q9Y5G3 927 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SIRT4Q9Y6E7 314 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 SALL1Q9NSC2 1324 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 NEURL4Q96JN8 1562 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 RNF222A6NCQ9 220 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR6C70A6NIJ9 312 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM200CA6NKL6 621 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GOLGA8JA6NMD2 632 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GOLGA8KD6RF30 607 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 E9PMD0 336 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GOLGA6L19H0YKK7 550 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PDLIM1O00151 329 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TRAFD1O14545 582 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TOR1AO14656 332 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 RS1O15537 224 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 RNMTO43148 476 aaKnown RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GRAP2O75791 330 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR2F2O95006 317 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 EGFP01133 1207 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 APRTP07741 180 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 IL6RP08887 468 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 HIST1H2AGP0C0S8 130 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 UBTFL1P0CB47 393 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 SMIM18P0DKX4 95 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GP9P14770 177 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PPP3CBP16298 524 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 TSPAN8P19075 237 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GATA3P23771 443 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 GNA11P29992 359 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 PPP2R1BP30154 601 aa4.09□□□□□ -1.75
HMGB3P21-201ENST00000452483 HMOX2P30519 316 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms