RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 ZNF180Q9UJW8 692 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 SLC12A4Q9UP95 1085 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 ENTPD4Q9Y227 616 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 ZNF835Q9Y2P0 537 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 LIPGQ9Y5X9 500 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 KIAA1549Q9HCM3 1950 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 DOCK7Q96N67 2140 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 PCNX3Q9H6A9 2034 aa8.02□□□□□ -1.13
RFX3-209ENST00000451859 ATP6AP2A0A1C7CYW4 349 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 SMIM23A6NLE4 172 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 NPIPA2E9PIF3 369 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 NPIPA3F8WFD2 350 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 FOXE1O00358 373 aaPredicted RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 RIPK2O43353 540 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 ATP6AP2O75787 350 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 SUPT7LO94864 414 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 OR4F21O95013 312 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 SEMA3DO95025 777 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 GPR75O95800 540 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 PDYNP01213 254 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 IGKV3-11P04433 115 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 P04436 131 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 RPS17P08708 135 aaKnown RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 CELA3AP09093 270 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 SBK3P0C264 359 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 FAM153BP0C7A2 387 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 COL6A2P12110 1019 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 PRF1P14222 555 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 COX6B1P14854 86 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 NT5EP21589 574 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 PIK3R1P27986 724 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 GCAP28676 217 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 SSTR4P31391 388 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 PIGAP37287 484 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 MAGEA5P43359 124 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 ALDH9A1P49189 494 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 MAPK12P53778 367 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 KCNJ2P63252 427 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 FAM153CQ494X1 144 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 CCNYL2Q5T2Q4 361 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 LGSNQ5TDP6 509 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 C6orf163Q5TEZ5 329 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 MRM1Q6IN84 353 aaKnown RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 XKRXQ6PP77 449 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 TMEM64Q6YI46 380 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 GK5Q6ZS86 529 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 MCEMP1Q8IX19 187 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 ST13P4Q8IZP2 240 aaPredicted RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 MMP21Q8N119 569 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 SLC34A3Q8N130 599 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 TMEM251Q8N6I4 163 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 CEP112Q8N8E3 955 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 LRRN4CLQ8ND94 238 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 OR5M9Q8NGP3 310 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 OR8K3Q8NH51 312 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 C16orf52Q8NHV5 167 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 FAM57AQ8TBR7 257 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 TRPC4APQ8TEL6 797 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 ZNF483Q8TF39 744 aaPredicted RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 SDCCAG3Q96C92 435 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 TRIM44Q96DX7 344 aaPredicted RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 ZNF837Q96EG3 531 aaPredicted RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 JSRP1Q96MG2 331 aaPredicted RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 FAM173AQ9BQD7 235 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 PELOQ9BRX2 385 aaKnown RBP8.01□□□□□ -1.13
RFX3-209ENST00000451859 NTMT1Q9BV86 223 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 EXO5Q9H790 373 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.01□□□□□ -1.13
RFX3-209ENST00000451859 AHSPQ9NZD4 102 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 TMEM216Q9P0N5 145 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 TSC22D4Q9Y3Q8 395 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 FBN2P35556 2912 aa8.01□□□□□ -1.13
RFX3-209ENST00000451859 FAM90A27PA6NNH2 459 aa8□□□□□ -1.13
RFX3-209ENST00000451859 FOXO6A8MYZ6 492 aa8□□□□□ -1.13
RFX3-209ENST00000451859 E9PLN8 166 aa8□□□□□ -1.13
RFX3-209ENST00000451859 C19orf84I3L1E1 186 aa8□□□□□ -1.13
RFX3-209ENST00000451859 ERAL1O75616 437 aaKnown RBP8□□□□□ -1.13
RFX3-209ENST00000451859 OTCP00480 354 aa8□□□□□ -1.13
RFX3-209ENST00000451859 ABHD2P08910 425 aa8□□□□□ -1.13
RFX3-209ENST00000451859 CT62P0C5K7 136 aa8□□□□□ -1.13
RFX3-209ENST00000451859 TAC1P20366 129 aa8□□□□□ -1.13
RFX3-209ENST00000451859 CNR1P21554 472 aa8□□□□□ -1.13
RFX3-209ENST00000451859 HMOX2P30519 316 aa8□□□□□ -1.13
RFX3-209ENST00000451859 SLC37A1P57057 533 aa8□□□□□ -1.13
RFX3-209ENST00000451859 CLCQ05315 142 aa8□□□□□ -1.13
RFX3-209ENST00000451859 NNATQ16517 81 aa8□□□□□ -1.13
RFX3-209ENST00000451859 ZNF630Q2M218 657 aaPredicted RBP8□□□□□ -1.13
RFX3-209ENST00000451859 SPRED3Q2MJR0 410 aa8□□□□□ -1.13
RFX3-209ENST00000451859 NDUFAF5Q5TEU4 345 aa8□□□□□ -1.13
RFX3-209ENST00000451859 HLA-DQA1Q5Y7H0 255 aa8□□□□□ -1.13
RFX3-209ENST00000451859 SLC22A10Q63ZE4 541 aa8□□□□□ -1.13
RFX3-209ENST00000451859 FAM180BQ6P0A1 224 aa8□□□□□ -1.13
RFX3-209ENST00000451859 METTL2BQ6P1Q9 378 aaKnown RBP8□□□□□ -1.13
RFX3-209ENST00000451859 ARHGAP11AQ6P4F7 1023 aa8□□□□□ -1.13
RFX3-209ENST00000451859 TRMT10CQ7L0Y3 403 aaKnown RBP8□□□□□ -1.13
RFX3-209ENST00000451859 PAGE2Q7Z2X7 111 aa8□□□□□ -1.13
RFX3-209ENST00000451859 COMMD6Q7Z4G1 85 aa8□□□□□ -1.13
RFX3-209ENST00000451859 SLC22A16Q86VW1 577 aa8□□□□□ -1.13
RFX3-209ENST00000451859 LURAP1LQ8IV03 231 aa8□□□□□ -1.13
RFX3-209ENST00000451859 GALNT12Q8IXK2 581 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms