RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 MAPK12P53778 367 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 SLC22A10Q63ZE4 541 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 SLC48A1Q6P1K1 146 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 PAOXQ6QHF9 649 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 SLC22A16Q86VW1 577 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 TM4SF18Q96CE8 201 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 DEFB127Q9H1M4 99 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 CHST11Q9NPF2 352 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 VPS29Q9UBQ0 182 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 PHF3Q92576 2039 aaKnown RBP17.89■□□□□ 0.45
USP40-207ENST00000450940 NINQ8N4C6 2090 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 EXPH5Q8NEV8 1989 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 G3V3Y1 287 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 GOLGA8RI6L899 631 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 ACOT7O00154 380 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 CDC40O60508 579 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP40-207ENST00000450940 KRT6AP02538 564 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 KRT6BP04259 564 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 CPMP14384 443 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 PORP16435 677 aaPredicted RBP17.88■□□□□ 0.45
USP40-207ENST00000450940 S1PR1P21453 382 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 HTR1EP28566 365 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 KRT6CP48668 564 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 NR0B1P51843 470 aaKnown RBP17.88■□□□□ 0.45
USP40-207ENST00000450940 TRA2BP62995 288 aaKnown RBP17.88■□□□□ 0.45
USP40-207ENST00000450940 PLGLB1Q02325 96 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 CSTF3Q12996 717 aaKnown RBP17.88■□□□□ 0.45
USP40-207ENST00000450940 FAM47EQ6ZV65 393 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 GPRIN3Q6ZVF9 776 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 GALNT12Q8IXK2 581 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 ZNF615Q8N8J6 731 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 CDYL2Q8N8U2 506 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 CHTF18Q8WVB6 975 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 PROK2Q9HC23 129 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 TUBA8Q9NY65 449 aaPredicted RBP17.88■□□□□ 0.45
USP40-207ENST00000450940 CNIH4Q9P003 139 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 EMCNQ9ULC0 261 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 STK38LQ9Y2H1 464 aa17.88■□□□□ 0.45
USP40-207ENST00000450940 CHCHD2Q9Y6H1 151 aaPredicted RBP17.88■□□□□ 0.45
USP40-207ENST00000450940 A0A1B0GVC2 190 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 A0A1W2PPM1 405 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 FAM166BA8MTA8 275 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 CT62P0C5K7 136 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 SERPINB3P29508 390 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 SSTR4P31391 388 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 DNASE1L1P49184 302 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 PKNOX1P55347 436 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 LCP2Q13094 533 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 CDSNQ15517 529 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 EMC4Q5J8M3 183 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 TCHHL1Q5QJ38 904 aaPredicted RBP17.87■□□□□ 0.45
USP40-207ENST00000450940 CD163Q86VB7 1156 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 TDRPQ86YL5 185 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 GSPT2Q8IYD1 628 aaKnown RBP17.87■□□□□ 0.45
USP40-207ENST00000450940 FBXW8Q8N3Y1 598 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 FAM109AQ8N4B1 249 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 TMEM251Q8N6I4 163 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 C1orf52Q8N6N3 182 aaKnown RBP17.87■□□□□ 0.45
USP40-207ENST00000450940 GBP7Q8N8V2 638 aaPredicted RBP17.87■□□□□ 0.45
USP40-207ENST00000450940 C17orf47Q8NEP4 570 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 OR7G1Q8NGA0 311 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 MARVELD3Q96A59 401 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 GAL3ST4Q96RP7 486 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 PPCSQ9HAB8 311 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 TBK1Q9UHD2 729 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 NCKAP5O14513 1909 aa17.87■□□□□ 0.45
USP40-207ENST00000450940 PKDREJQ9NTG1 2253 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 C2orf92A0A1B0GVN3 265 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 SERTM1A2A2V5 107 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 OR14I1A6ND48 311 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 G3V2L1 256 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 ULK1O75385 1050 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 PDE9AO76083 593 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 CLDN14O95500 239 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 ATP1B1P05026 303 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 ENO1P06733 434 aaKnown RBP17.86■□□□□ 0.45
USP40-207ENST00000450940 TPOP07202 933 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 TNFRSF8P28908 595 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 PIGAP37287 484 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 MGAT2Q10469 447 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 MAP4K2Q12851 820 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 NTRK2Q16620 822 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 FAM219BQ5XKK7 198 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 C3P1Q6ZMU1 363 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 NCCRP1Q6ZVX7 275 aaPredicted RBP17.86■□□□□ 0.45
USP40-207ENST00000450940 TAGAPQ8N103 731 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 METTL6Q8TCB7 284 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.86■□□□□ 0.45
USP40-207ENST00000450940 ADIPOR1Q96A54 375 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 CCDC126Q96EE4 140 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 HBEGFQ99075 208 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 OR10A5Q9H207 317 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 TP63Q9H3D4 680 aaPredicted RBP17.86■□□□□ 0.45
USP40-207ENST00000450940 GSTO2Q9H4Y5 243 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 ZNF639Q9UID6 485 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 MCM8Q9UJA3 840 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 CNOT11Q9UKZ1 510 aaKnown RBP17.86■□□□□ 0.45
USP40-207ENST00000450940 PSME2Q9UL46 239 aa17.86■□□□□ 0.45
USP40-207ENST00000450940 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.86■□□□□ 0.45
USP40-207ENST00000450940 ANKRD33BA6NCL7 494 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms